Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02687 and BPUM_1549

See Amino acid alignment / Visit BSNT_02687 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence dna-align/BSNT_02687___tsf.1.24716.seq
#    -bsequence dna-align/BPUM_1549___tsf.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02687___tsf-BPUM_1549___tsf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02687___tsf-BPUM_1549___tsf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02687___tsf
# 2: BPUM_1549___tsf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 891
# Identity:     736/891 (82.6%)
# Similarity:   736/891 (82.6%)
# Gaps:          18/891 ( 2.0%)
# Score: 3056.5
# 
#
#=======================================

BSNT_02687___      1 ATGGCAATTACTGCACAGCAAGTAAAAGAACTGCGTGAAAAAACTGGCGC     50
                     |||||.||||||||.||...|||.||||||||||||.||||||||||.||
BPUM_1549___t      1 ATGGCTATTACTGCTCAATTAGTTAAAGAACTGCGTCAAAAAACTGGTGC     50

BSNT_02687___     51 GGGCATGATGGATTGTAAAAAAGCGTTAACTGAAACTGACGGAGATATGG    100
                     .||.||||||||.|||||||||||||||||.||||||||.||.||.||.|
BPUM_1549___t     51 AGGTATGATGGACTGTAAAAAAGCGTTAACAGAAACTGATGGTGACATCG    100

BSNT_02687___    101 ACAAAGCAATTGACCTTTTAAGAGAAAAAGGGATTGCAAAAGCAGCGAAA    150
                     ||||||||||.||.|||.|||||||||||||.|||||||||||.||||||
BPUM_1549___t    101 ACAAAGCAATCGATCTTCTAAGAGAAAAAGGAATTGCAAAAGCTGCGAAA    150

BSNT_02687___    151 AAAGCTGACCGTATCGCAGCAGAAGGTTCTACTCTTATTAAAACTGACGG    200
                     |||||.||||||||.||.||||||||.|..||||||||.||||||||.||
BPUM_1549___t    151 AAAGCAGACCGTATTGCTGCAGAAGGATTAACTCTTATCAAAACTGATGG    200

BSNT_02687___    201 CAACAAAGGCGTTATCCTAGAAGTAAACTCTGAAACTGATTTCGTTGCGA    250
                     |||||.||||||.|||||||||||.||||||||.||||||||||||||||
BPUM_1549___t    201 CAACACAGGCGTGATCCTAGAAGTGAACTCTGAGACTGATTTCGTTGCGA    250

BSNT_02687___    251 AAAACGAAGGTTTTAAAGAGCTTCTTAAC--ACTTTAGCTGACCACCTTC    298
                     ||||||||||.||..||...|||||||||  ||||  |||||.||..|.|
BPUM_1549___t    251 AAAACGAAGGATTCCAATCACTTCTTAACGAACTT--GCTGATCATTTGC    298

BSNT_02687___    299 TTGC----AAACACGC--CAGCTGATGTTGAAGAAGC-AATGGGCCAAAA    341
                     |.||    ||||..||  ||      .|||||||||| .|||...| .||
BPUM_1549___t    299 TAGCTGCTAAACCTGCAACA------ATTGAAGAAGCTCATGCTTC-TAA    341

BSNT_02687___    342 AATGGAAAATGGCTCAACTGTTGAAGAGTACATCACAAGCGCAGTTGCTA    391
                     |||||||||.||.|||||.|||||||||.|.||.|||...|||.||||.|
BPUM_1549___t    342 AATGGAAAACGGTTCAACAGTTGAAGAGCATATTACATCTGCAATTGCGA    391

BSNT_02687___    392 AAATCGGTGAGAAAATCACTCTTCGCCGCTTTACAGTTCTTACAAAAGAC    441
                     |||||||.||||||||||||||.||.||.||..|.|||.|.||||||||.
BPUM_1549___t    392 AAATCGGAGAGAAAATCACTCTACGTCGTTTCTCTGTTATCACAAAAGAA    441

BSNT_02687___    442 GACAGCTCTGCATTCGGTGCTTACCTTCACATGGGCGGCCGCATCGGTGT    491
                     ||.|.|.|.|||||||||.|||||.|.|||||||||||.|||||||||||
BPUM_1549___t    442 GATAACGCAGCATTCGGTTCTTACTTACACATGGGCGGACGCATCGGTGT    491

BSNT_02687___    492 ATTAACTGTTCTCAACGGTACAACTGATGAAGAAACTGCGAAAGATATCG    541
                     .|||.|||||||.|||||.||||||||.|||||...|||.|.|||.||||
BPUM_1549___t    492 GTTAGCTGTTCTTAACGGAACAACTGACGAAGAGCTTGCAAGAGACATCG    541

BSNT_02687___    542 CAATGCACGTTGCTGCGGTTAACCCTCGTTACATTTCTCGTGATCAAGTA    591
                     ||||||||||||||||.||.||||||...||||||||||||||.|||||.
BPUM_1549___t    542 CAATGCACGTTGCTGCTGTAAACCCTAAATACATTTCTCGTGACCAAGTG    591

BSNT_02687___    592 TCTGAAGAAGAAACAAATCATGAGCGTCAAATCTTAACTCAGCAAGCCCT    641
                     ||.|||||||||.||||.|.||||||..||.|.|||||.||||||||.||
BPUM_1549___t    592 TCAGAAGAAGAAGCAAACCGTGAGCGCGAAGTATTAACACAGCAAGCGCT    641

BSNT_02687___    642 CCAAGAAGGCAAACCTGAAAACATCGTAGCGAAAATGGTTGAAGGCCGTC    691
                     .||||||||.||||||||||||||||||||.||||||||.||||||||||
BPUM_1549___t    642 ACAAGAAGGAAAACCTGAAAACATCGTAGCTAAAATGGTAGAAGGCCGTC    691

BSNT_02687___    692 TGAACAAATTCTTCGAAGAAATTTGTCTATTAGACCAAGCGTTCGTTAAA    741
                     |.|||||||||||||||||||||||..||.|.||||||||.|||||||||
BPUM_1549___t    692 TAAACAAATTCTTCGAAGAAATTTGCTTACTTGACCAAGCTTTCGTTAAA    741

BSNT_02687___    742 AACCCAGATGAAAAAGTGAAACAAGTTATTGCAGCGAAAAACGCTACTGT    791
                     ||||||||||||||||||||||||||..|.||.|||||||||||.|...|
BPUM_1549___t    742 AACCCAGATGAAAAAGTGAAACAAGTAGTAGCTGCGAAAAACGCAAGCAT    791

BSNT_02687___    792 TCAAACTTTTGTCCGCTATGAAGTTGGAGAAGGCATCGAAAAACGTCAAG    841
                     ||||||||.|||.|||||||||||.||.|||||.|||||.||.|||||||
BPUM_1549___t    792 TCAAACTTATGTTCGCTATGAAGTGGGCGAAGGTATCGAGAAGCGTCAAG    841

BSNT_02687___    842 AAAACTTTGCTGAAGAAGTAATGAACCAAGTGAAAAAATAA    882
                     |.|||||||||||||||||.||||.||||||||||||||||
BPUM_1549___t    842 ACAACTTTGCTGAAGAAGTTATGAGCCAAGTGAAAAAATAA    882


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