Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02717 and BPUM_1578
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_02717___spoVFB.1.24716.seq
# -bsequence dna-align/BPUM_1578___spoVFB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02717___spoVFB-BPUM_1578___spoVFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02717___spoVFB-BPUM_1578___spoVFB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02717___spoVFB
# 2: BPUM_1578___spoVFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 456/614 (74.3%)
# Similarity: 456/614 (74.3%)
# Gaps: 31/614 ( 5.0%)
# Score: 1661.5
#
#
#=======================================
BSNT_02717___ 1 ATGTCGTCATTAAAAGGAAAAAGAATCGGGTTTGGGCTGACCGGGTCGCA 50
|||.|..||||||||||.|||||||||||.|||||..|.||.||.||.||
BPUM_1578___s 1 ATGACAACATTAAAAGGGAAAAGAATCGGCTTTGGATTAACTGGTTCCCA 50
BSNT_02717___ 51 TTGCACATATGAAGCGGTTTTCCCGCAAATTGAGGCGTTGGTCAATGAAG 100
.||.||.||.|||||.||||..||||||||.||.||..|.||.||.||||
BPUM_1578___s 51 CTGTACGTACGAAGCTGTTTATCCGCAAATCGAAGCACTTGTAAAAGAAG 100
BSNT_02717___ 101 GAGCTGAAGTCCGTCCGGTTGTCACATTTAATGT--AAAATCCACAAATA 148
||||.|||||.|||||.||.||..|||.||..|| |.|| |||.||||
BPUM_1578___s 101 GAGCAGAAGTGCGTCCAGTGGTGTCATATACGGTTCAGAA--CACGAATA 148
BSNT_02717___ 149 CCCGATTTGGAGAGGGCGCAGAATGGGTTAAAAAAATTGAAGACCTGACT 198
|..||||.|||||.||.||.||.|||.||.|....||.||..|..|||||
BPUM_1578___s 149 CAAGATTCGGAGATGGGGCGGACTGGATTGAGCGGATCGAGAAGTTGACT 198
BSNT_02717___ 199 GGATATGAGGCCATTGATTCGATTGTAAAGGCAGAACCTCTTGGACCGAA 248
||||.|.||||.|||||.||.||.||.||.|||||.||.||.|||||.||
BPUM_1578___s 199 GGATTTAAGGCGATTGACTCCATCGTGAAAGCAGAGCCGCTCGGACCTAA 248
BSNT_02717___ 249 GCTGCCCCTTGACTGCATGGTCATTGCGCCTTTAACAGGCAATTCAATGA 298
||||||.|||||.||.|||||||||||.||.||||||||.|||||||||
BPUM_1578___s 249 GCTGCCACTTGATTGTATGGTCATTGCTCCATTAACAGGGAATTCAATG- 297
BSNT_02717___ 299 GC-AAGCTGGCAAATGCCATGACGGACAGCCCGGTGCTGATGGCGGCAAA 347
|| ||..|.||||||||||||||.||||||||.||..|.|||||.|||||
BPUM_1578___s 298 GCGAAATTTGCAAATGCCATGACAGACAGCCCTGTTTTAATGGCTGCAAA 347
BSNT_02717___ 348 AGCGACAATCCGGAACAATCGGCCTGTCGTTCTGGGTATCTCGACAAATG 397
|||.||.||.||.||..||||.|||||.|||.|.||.||.||.|||||||
BPUM_1578___s 348 AGCAACCATTCGAAATCATCGTCCTGTTGTTTTAGGCATTTCAACAAATG 397
BSNT_02717___ 398 ATGCTCTTGGTTTAAACGGAACAAATTTAATGAGGCTCATGTCAACAAAA 447
||||.||.||.|||||.||.||||||||.||||||||.|||||.||||||
BPUM_1578___s 398 ATGCGCTAGGCTTAAATGGTACAAATTTGATGAGGCTGATGTCGACAAAA 447
BSNT_02717___ 448 AATATCTTTTTTATTCCATTCGGGCAAGATGATCCATTTAAAAAACCGAA 497
|||||.||.|||||||||||.||.|||||||||||.|||||||||||||.
BPUM_1578___s 448 AATATTTTCTTTATTCCATTTGGTCAAGATGATCCGTTTAAAAAACCGAC 497
BSNT_02717___ 498 TTCAATGGTAGCCAAAATGGATCTGCTACCGCAAACGATTGAAAAGGCAC 547
.||.|||||.||.||.|||||||||||..|.||||||.|.|||.||||||
BPUM_1578___s 498 CTCCATGGTCGCAAACATGGATCTGCTTTCTCAAACGGTAGAAGAGGCAC 547
BSNT_02717___ 548 T----CATGCACCAG-CAGCTTCAGCCGATTCTAGTTGAGAATTATCAGG 592
| ||| || ||..||||.||.|||.|| ||| |
BPUM_1578___s 548 TAGAGCAT-----AGACAAATTCAACCAATTTTA----------ATC--G 580
BSNT_02717___ 593 G---AAATGACTAA 603
| ||..||.|||
BPUM_1578___s 581 GACCAAGCGAATAA 594
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