Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02719 and BPUM_1580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence dna-align/BSNT_02719___dapG.1.24716.seq
# -bsequence dna-align/BPUM_1580___dapG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02719___dapG-BPUM_1580___dapG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02719___dapG-BPUM_1580___dapG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02719___dapG
# 2: BPUM_1580___dapG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1262
# Identity: 880/1262 (69.7%)
# Similarity: 880/1262 (69.7%)
# Gaps: 94/1262 ( 7.4%)
# Score: 3030.0
#
#
#=======================================
BSNT_02719___ 1 GTGAAGATAATTGTTCAAAAGTTCGGCGGAACATCAGTAAAAGATGATAA 50
|||||.||||||||.|||||.||.|||||.|||||.||.|||||||||.|
BPUM_1580___d 1 GTGAAAATAATTGTCCAAAAATTTGGCGGTACATCTGTCAAAGATGATCA 50
BSNT_02719___ 51 AGGCCGCAAACTGGCTTTAGGGCATA--TTAAAGAAGCAATCAGTG-AAG 97
|||..|.|||..|||..|.|..|||| |||..| |||| .||.| |||
BPUM_1580___d 51 AGGTAGAAAAAGGGCACTTGCACATATCTTATCG--GCAA-AAGAGAAAG 97
BSNT_02719___ 98 GATATAA---GGTTGTCGTTGTCGTTTCAGCGATGGGCCGAAAAGGAGAC 144
|.||||| ||||||| |||||.||.||||||||.||||||||.||.
BPUM_1580___d 98 GCTATAAGTCGGTTGTC---GTCGTATCCGCGATGGGACGAAAAGGCGAT 144
BSNT_02719___ 145 CCGTATGCAACAGATTCTTTGCTTGGGCTGCTTTACGGCAATCAGTCAGC 194
||.|||||.||.|||.|.||||||||.|||||||||||
BPUM_1580___d 145 CCTTATGCGACCGATACGTTGCTTGGTCTGCTTTACGG------------ 182
BSNT_02719___ 195 GATTTCTCCTAGGGAGCAG---------------------GATTTGCTTT 223
|||.|.|||| ||.|||||..
BPUM_1580___d 183 ---------TAGCGCGCAGCATATGACAAATCGAGAAAAAGACTTGCTCG 223
BSNT_02719___ 224 TATCTTGCGGAGAGACTATTTCCTCTGTCGTCTTTACAAGTATGCTGCTT 273
|.||.||||||||||.||||||..||||.||.|||.||||||||||...|
BPUM_1580___d 224 TTTCCTGCGGAGAGAATATTTCAGCTGTTGTGTTTTCAAGTATGCTAAAT 273
BSNT_02719___ 274 GATAACGGTGTGAAAGCAGCTGCGCTGACAGGGGCTCAGGCTGGCTTTTT 323
||.|||||..|.|||||.|..|||.|||||||.||||||||.||.|||.|
BPUM_1580___d 274 GAAAACGGACTAAAAGCTGTAGCGATGACAGGCGCTCAGGCGGGTTTTGT 323
BSNT_02719___ 324 AACGAATGATCAGCATACCAATGCAAAAATCATTGAAATGAAACCGGAGC 373
.||..||.|..|||||||.|.|||.|||||.|||||.|||||....||||
BPUM_1580___d 324 GACAGATAAGGAGCATACGAGTGCGAAAATTATTGATATGAAGTGTGAGC 373
BSNT_02719___ 374 GTTTATTCAGTGTGCTCG------------CCAATCATGATGCGGTAGTC 411
|| |||| |..|.|||||||..||.||.
BPUM_1580___d 374 GT------------CTCGAAGCGGCACTATCTGAACATGATGTTGTCGTT 411
BSNT_02719___ 412 GTCGCAGGCTTCCAGGGCGCAACTGAAAAGGGTGATACAACAACAATCGG 461
||.||.||.|||||.||.||..|..||||.||.||....||.||||||||
BPUM_1580___d 412 GTTGCTGGGTTCCAAGGAGCCGCGAAAAATGGAGACGTGACCACAATCGG 461
BSNT_02719___ 462 CAGAGGGGGCAGCGATACGTCTGCAGCCGCACTCGGAGCAGCTGTTG-AT 510
..||||.|||||.||||||||||||||.||..|.||.||.|| .||| |.
BPUM_1580___d 462 ACGAGGTGGCAGTGATACGTCTGCAGCTGCTTTAGGTGCTGC-ATTGCAG 510
BSNT_02719___ 511 GCGGAATACATCGATATTTTCACCGATGTAGAAGGCGTGATGACTGCTGA 560
||.||.|.|||.||||||||.||.||||||||||||||.|||||.||.||
BPUM_1580___d 511 GCAGACTTCATTGATATTTTTACAGATGTAGAAGGCGTCATGACGGCAGA 560
BSNT_02719___ 561 CCCAAGAGTGGTGGAAAATGCAAAACCGCTTCCTGTTGTGACGTATACGG 610
.||..|..|.||.|||||||||||.|||||....||.|||||.|||||.|
BPUM_1580___d 561 TCCCCGTATTGTTGAAAATGCAAAGCCGCTCAGAGTCGTGACATATACAG 610
BSNT_02719___ 611 AAATCTGCAACCTGGCGTATCAGGGGGCCAAGGTCATTCATCCGCGTGCT 660
||||.||||||||.||.||.||.||.||.||.||||||||.|||.|.|||
BPUM_1580___d 611 AAATTTGCAACCTTGCATACCAAGGAGCAAAAGTCATTCACCCGAGAGCT 660
BSNT_02719___ 661 GTGGAAATCGCAATGCAGGCCAAGGTTCCGATCCGCGTCCGTTCGACTTA 710
||.|||||.||.|||||.||.||.||.||.||..|.||||||||.||.||
BPUM_1580___d 661 GTCGAAATTGCGATGCAAGCAAAAGTACCAATGAGGGTCCGTTCAACATA 710
BSNT_02719___ 711 TTCGAATGATAAAGGTACATTGGTGACATCACATCACTCTTCCAAGGTCG 760
.||..||||..|.||.|||.|.||.||.|||||..||||....||..|..
BPUM_1580___d 711 CTCTGATGAAGAGGGCACACTCGTCACGTCACACTACTCGGATAAAATGA 760
BSNT_02719___ 761 GCAGTGATGTTTTTGAAAGGCTGATTACGGGAATCGCCCATGTCAAAGAT 810
||..||||||.|..||..|.||.||||||||.||.||.||||||||.|||
BPUM_1580___d 761 GCCATGATGTGTACGACCGCCTCATTACGGGTATTGCACATGTCAATGAT 810
BSNT_02719___ 811 GTCACGCAGTTCAAAGTGCCTGCGAAAATCGGCCAGTATAACGTTCAGAC 860
||.|||||..|||||||.||.||.|||...||.|||||||.|||.||.||
BPUM_1580___d 811 GTGACGCAAATCAAAGTCCCAGCAAAAGAAGGGCAGTATAGCGTCCAAAC 860
BSNT_02719___ 861 TGAAGTGTTCAAGGCTATGGCAAACGCTGGAATCAGTGTCGATTTCTTTA 910
.||.||.||.||.||.|||||.||.||...||||||||||||||||||.|
BPUM_1580___d 861 AGAGGTCTTTAAAGCGATGGCTAATGCACAAATCAGTGTCGATTTCTTCA 910
BSNT_02719___ 911 ACATTACACCTAGTGAAATCGTCTATACGGTAGCCG--GAAATAAAACAG 958
|||||||.||.|||||.||.||||||||.||..|.| |.||| .||.|
BPUM_1580___d 911 ACATTACGCCGAGTGAGATTGTCTATACCGTGACAGGTGCAAT--GACTG 958
BSNT_02719___ 959 AAA----CAGCTCAGCGTATTTTAATGGATATGGGCTATGATCCAATGGT 1004
||| ||.||| .||..|||..|||.|.||||||...|||||.||
BPUM_1580___d 959 AAAAGGCCACCTC----GATCCTAAAAGATCTTGGCTATACGCCAATTGT 1004
BSNT_02719___ 1005 GACGAGAAACTGCGCGAAGGTATCGGCGGTCGGCGCGGGCATTATGGGTG 1054
.||.|.|||.||.|||||.|||||.||.||.|||||.||.||.|||||||
BPUM_1580___d 1005 CACAACAAATTGTGCGAAAGTATCAGCTGTTGGCGCAGGTATCATGGGTG 1054
BSNT_02719___ 1055 TTCCCGGTGTTACGTCCAAAATTGTATCGGCTCTTTCAGAAAAAGAAATT 1104
|.||.|||||.||.||.|||||||||||.||||||||.|||.||.|.|||
BPUM_1580___d 1055 TACCAGGTGTCACATCTAAAATTGTATCAGCTCTTTCCGAACAAAACATT 1104
BSNT_02719___ 1105 CCGATCCTTCAGTCGGCTGACAGCCATACGACGATATGGGTGCTCGTCCA 1154
|||||..|.||.||||||||||||||||||||.||.||||||||.||..|
BPUM_1580___d 1105 CCGATTTTACAATCGGCTGACAGCCATACGACCATTTGGGTGCTAGTGAA 1154
BSNT_02719___ 1155 TGAAGCGGATATGGTTCCTGCTGTAAACGCTTTGCATGAAGTGTTTGAAC 1204
.||||...|.|||....|.|||||.||.||..||||.|||||||||||||
BPUM_1580___d 1155 CGAAGAAAACATGAGAGCAGCTGTCAATGCCCTGCACGAAGTGTTTGAAC 1204
BSNT_02719___ 1205 TTTCGAAG-TAA 1215
|||| ||| |||
BPUM_1580___d 1205 TTTC-AAGATAA 1215
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