Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02732 and BPUM_1588
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_02732.1.24716.seq
# -bsequence dna-align/BPUM_1588.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02732-BPUM_1588.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02732-BPUM_1588.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02732
# 2: BPUM_1588
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1384
# Identity: 915/1384 (66.1%)
# Similarity: 915/1384 (66.1%)
# Gaps: 206/1384 (14.9%)
# Score: 2856.5
#
#
#=======================================
BSNT_02732 1 ATGTCATATGTTAATGA---ACTCA-AATCAAAG--------CACGGC-G 37
|||| |||.| ||...||| |||..| |
BPUM_1588 1 -------------ATGACGTACTTACAAGAGAAGACACTAGACACACCTG 37
BSNT_02732 38 GT-TTAACCGCA----CATATTGTAAAAACAGAAAAATTCAAAACCGTCT 82
|| || || ||||||||.||||||||||||||.|||||.|||.
BPUM_1588 38 GTCTT-----CATACTCATATTGTCAAAACAGAAAAATTTAAAACGGTCA 82
BSNT_02732 83 CGCTTATTTTTAAGATGCTTGCGCCGCTGACAAAGGATCAAGTCACCAAA 132
|..|..|||||||.|||||.|||||.||..|.||.|||.|.|||||||
BPUM_1588 83 CAATCCTTTTTAAAATGCTCGCGCCTCTATCGAAAGATGATGTCACCA-- 130
BSNT_02732 133 AGAGCG----CTTCTCCCGCATGTGCTTCTTCGCGGAAC---GAAAAGCC 175
.||| |||.|||||||||||||..|..|.||||| ||||
BPUM_1588 131 --TGCGTTCACTTTTCCCGCATGTGCTGTTAAGAGGAACAGAGAAA---- 174
BSNT_02732 176 AT-CCGAAAACCGCAGAATTGCGTTCATACTTGGATGAGCTGTACGGCAC 224
|| ||||||||.|.||||||||||.|.||.||.||||||||.||.||..|
BPUM_1588 175 ATGCCGAAAACAGGAGAATTGCGTGCTTATTTTGATGAGCTTTATGGTGC 224
BSNT_02732 225 GTCAGTATCGGCTGATCTTACGAAAAAAGGAGAGCGGCACGTCATTACGT 274
|.|.||.||.||.||..|..||||||||||||||...|||.|||||||.|
BPUM_1588 225 GACTGTTTCAGCAGACATGGCGAAAAAAGGAGAGAATCACATCATTACCT 274
BSNT_02732 275 TCAGGCTTGAAATTCCGAATGAAAAATATTTAAAAGACCAAACGCCGCTA 324
||.|.||.|||||..|.|||||||||||||||||.||.|||||.||..||
BPUM_1588 275 TCCGCCTAGAAATGGCAAATGAAAAATATTTAAAGGATCAAACCCCTTTA 324
BSNT_02732 325 CTTGAGAAAGG----GCTCCAGCTT-CTCGCAGAAATCGTCTTTTC--AC 367
||.||.||||| || ||| ||..|.| |||..||.||| .|
BPUM_1588 325 CTAGAAAAAGGAATTGC-----CTTACTATCTG--ATCTACTATTCCATC 367
BSNT_02732 368 C---TGCTTTAGAGGGAGACGCTTTTCAGTCACA--ATATGTGGCTCAAG 412
| ||.|..|||.|||| || |||||||| | ||||||.|.|||||
BPUM_1588 368 CGTATGTTGAAGATGGAG-CG---TTCAGTCA-ATTATATGTAGATCAAG 412
BSNT_02732 413 AAAAACGGACGCTTAAGCAAAGAATCCAAGCCGTCTATGATGATAAAATG 462
|||||||.||..|.||.||..|.||.|||||.||.|||||||||||||||
BPUM_1588 413 AAAAACGCACTTTAAAACAGCGGATTCAAGCAGTGTATGATGATAAAATG 462
BSNT_02732 463 CGCTATTCGAATTTAAGGCTGATACAGGAAATGTGCAAAAATGAGCCTTA 512
||.||.||.|||||||||||..|.|||||||||||||||..|||.||.||
BPUM_1588 463 CGTTACTCAAATTTAAGGCTTGTGCAGGAAATGTGCAAAGGTGAACCGTA 512
BSNT_02732 513 CGCGCTTCATGTCAATGGTGAAATCGACGATGTTGATGAC-ATTACGGCA 561
.||.||.||.||||||||.|||||.||.|||.|.|| .|| ||.||.||
BPUM_1588 513 TGCACTGCACGTCAATGGAGAAATGGAAGATATCGA-AACGATCACCGC- 560
BSNT_02732 562 GAGCAATTATAC-------GAAACATACCA--AAGCGCTATCCAAAAAGA 602
|.||.| |||.||||.|| |.|||| |.||||.|.|
BPUM_1588 561 ------TCATTCGCTGTTTGAAGCATATCAGCATGCGC--TTCAAACAAA 602
BSNT_02732 603 CCAGCTTGATCTATATGTTGTTGGCGACGTGGACAGTAACCAGGTACAAT 652
.|||||||||||.||||||||.||.||.||.||| .|||.|| || ||
BPUM_1588 603 TCAGCTTGATCTTTATGTTGTGGGAGATGTAGAC--GAACAAG--AC-AT 647
BSNT_02732 653 CGGC--AATTG---ATAAGTATTTCAAAACAGAAG----AGCGCACTCTT 693
|.|| .||.| .|.|.||.|||||||| ||| ||.|.||
BPUM_1588 648 CAGCCGGATGGTCTCTCAATACTTCAAAAC--AAGTGATAGAGAAC---- 691
BSNT_02732 694 GGCACGATTGAAAACAATCACGCTGATGAAAAAGTTCAGC---------- 733
||.| .|||||| |||||||| .|||||
BPUM_1588 692 ----CGGT--CAAACAA-CACGCTGA--------ATCAGCAAGCACGCAA 726
BSNT_02732 734 -------CAAAAGAAGTAATTGATGAAGAGGATGTCAAGCAAGGAAAACT 776
||||||||||.||.||||||||.||.||.||||||||.||.||
BPUM_1588 727 AGAGAAGCAAAAGAAGTCATCGATGAAGAAGACGTGAAGCAAGGGAAGCT 776
BSNT_02732 777 GAATATCGGCTACCGCACCAGCAT--CACTTATACAGATCAGGATTATCC 824
|||||||||||..||||| |||| .||...|.|||||.|.||||||||
BPUM_1588 777 GAATATCGGCTTTCGCAC--GCATACGACGATTGCAGATGACGATTATCC 824
BSNT_02732 825 TGCTTTACAAGTGTTTAACGGATTGTTCGGCGGATTCTCTCATTCTAAAC 874
.|||||.||..|||||||.||..|.||||||||.|||||.||.||.||.|
BPUM_1588 825 GGCTTTGCATTTGTTTAATGGCATATTCGGCGGGTTCTCGCACTCGAAGC 874
BSNT_02732 875 TTTTCATTAATGTTCGGGAAAAAGCCAGTCTTGCTTACTACGCGGCTTCG 924
|.|||||.|||||||||||||||||.||||||||.||.||.||.|..||.
BPUM_1588 875 TATTCATCAATGTTCGGGAAAAAGCAAGTCTTGCGTATTATGCTGTGTCT 924
BSNT_02732 925 CGTATAGAAAGTTTTAAAGGCTTGTTAATGGTGATGTCAGGCATTGAAGT 974
.|..|.||.||.||||||||.|||.|.|||||.||||||||.||||||||
BPUM_1588 925 AGACTTGAGAGCTTTAAAGGTTTGATGATGGTCATGTCAGGGATTGAAGT 974
BSNT_02732 975 GAAAAATTTTGAACAGGCGGTTTCGATTATTGCTGAGCAATTCCAGGCAA 1024
....||.|.|.|.|||||.||....||.|||...||.|||||..|.||.|
BPUM_1588 975 CGGCAACTATCAGCAGGCAGTAGACATCATTAAAGAACAATTTGAAGCGA 1024
BSNT_02732 1025 TGAAAAATGGCGA--TTTCA-ATG-AGCAGGATATAGCACAGACAAAGGC 1070
||.||||.||.|| ||||| ||| ||| .||.|..||.|||||.||
BPUM_1588 1025 TGCAAAAAGGTGATTTTTCAGATGAAGC----GATTGACCAAACAAAAGC 1070
BSNT_02732 1071 CGTTATTCG----AAATCAAGTGCTGGAAACGATTGATACAGCATACGGT 1116
.| ||| ||||||..|.||.||||||||.||||||.|.||.||.
BPUM_1588 1071 TG----TCGTCAAAAATCAGCTTCTTGAAACGATCGATACATCTTATGGG 1116
BSNT_02732 1117 TTATCTGAGTTTTTATATCAGCAGGCCGCTGCT--CAAGTCGA------- 1157
..|.|.||.|...|.||||||||.||||.|| | |||...||
BPUM_1588 1117 ACAGCAGAATACCTGTATCAGCATGCCGTTG-TGCCAACAGGAGAAACGC 1165
BSNT_02732 1158 --GATTCCTATCGAAGACTTTCTTGCAAATA-TTGA--GAATGTCACAAA 1202
|||||| ||.||.|||..| |||| || ||.|||||
BPUM_1588 1166 TTGATTCC-----------TTTTTACAAGCACTTGATCGA--GTGACAAA 1202
BSNT_02732 1203 AGAGGATATCATTAAAGCCGG--CGAAAA--GATTCAGCTTGATACGACT 1248
||||||.|||||.||||..|| .||||| ||.| ..||||||||.
BPUM_1588 1203 AGAGGACATCATCAAAGTGGGTCAGAAAATCGAAT----GGGATACGACC 1248
BSNT_02732 1249 TA-TTTCTTAAAAGGGACGGAGGGTGCATCTTGA 1281
|| |||||| |||||.|||||||||||.||.|||
BPUM_1588 1249 TATTTTCTT-AAAGGAACGGAGGGTGCTTCATGA 1281
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