Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04569 and BPUM_1610
See
Amino acid alignment /
Visit
BSNT_04569 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence dna-align/BSNT_04569___yuaB.1.24716.seq
# -bsequence dna-align/BPUM_1610___yuaB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04569___yuaB-BPUM_1610___yuaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04569___yuaB-BPUM_1610___yuaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04569___yuaB
# 2: BPUM_1610___yuaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 627
# Identity: 347/627 (55.3%)
# Similarity: 347/627 (55.3%)
# Gaps: 174/627 (27.8%)
# Score: 863.0
#
#
#=======================================
BSNT_04569___ 1 ATGAAACGCAAAT----TATTATCTTCTTTGGCA-------ATTAGT--- 36
||||||...|.|| .||.|||.|..|.||.| |.|.||
BPUM_1610___y 1 ATGAAAAAAACATGGACAATGATCATGATGGGGATGCTCACACTGGTCAT 50
BSNT_04569___ 37 -GCATTAAGTCTCGGGTTACTCG-TTTCTGCA-CCTACAGCTTCTTTCGC 83
|||.|| |||| ||| || ||.|.||| ||
BPUM_1610___y 51 GGCACTA----TCGG--TAC-CGATTGCCGCATCC--------------- 78
BSNT_04569___ 84 GGCTGAA----------------TCTA--CATCAACTAAAGCTCATA--- 112
|||||| .|.| |||||||.||.|| ||.|
BPUM_1610___y 79 -GCTGAAGGGGCCACACAGGAGGGCAAGGCATCAACAAACGC-CAGACCA 126
BSNT_04569___ 113 -CTGAATCTACTATGAGAACACAGTCTACAGCTTCATTGTTCGCAACAAT 161
|||||..| ||||.|||.| .|||||.| ||||
BPUM_1610___y 127 GCTGAACTT--TATGCGAAAA----TTACAGGT------------ACAA- 157
BSNT_04569___ 162 CACTGGCGCCAGCAAAACGGAATGGTCTTTCTCAGATATCGAATTGACTT 211
|..|||| ||||||||||||.||.||.|||||..||||.|
BPUM_1610___y 158 -------GTAAGCA----GGAATGGTCTTTTTCTGACATCGAGCTGACAT 196
BSNT_04569___ 212 ACCGTCCAAACACGCTTC-----TCAGCCTTGGCGTTATGGAGTTTACAT 256
||||.||||| ||| |.||.||.||.|..||.|||||.||||
BPUM_1610___y 197 ACCGCCCAAA-----TTCTGTATTAAGTCTCGGTGCCATTGAGTTCACAT 241
BSNT_04569___ 257 TGCCAAGC-GGATTTACTGCAAAC----ACGAAAGACACACTGAACGGAA 301
|.|| .|| ||.||| |||.| ||.|||||||...|.||.||||
BPUM_1610___y 242 TACC-TGCAGGCTTT----CAAGCGACAACAAAAGACATCTTCAATGGAA 286
BSNT_04569___ 302 ATGC-CTTGCGTACAACACAG----ATCCTCAATAACGGGAAAACAGTAA 346
|.|| | ||.||.|||| ||..|.||.|..||.|||||.||..
BPUM_1610___y 287 AAGCAC-----TAAAAGACAGCTACATTTTAAACAGTGGAAAAACGGTCC 331
BSNT_04569___ 347 GAGTTCCTTTGGC---ACTTGATTTGTTAGGAGCTGGCGAATTTAAATTA 393
|..|||| .|| |||.|||||.||||||..|....|||||||||||
BPUM_1610___y 332 GCATTCC---AGCTAGACTCGATTTATTAGGAATTTCACAATTTAAATTA 378
BSNT_04569___ 394 AAACTGAATAACAAAACACTTCCTGCCGCTGGTACATACACTTTCCGTGC 443
.||||.....|||||..|||||||||.||.||||||||.||.||||||||
BPUM_1610___y 379 CAACTTTCACACAAAGTACTTCCTGCTGCAGGTACATATACGTTCCGTGC 428
BSNT_04569___ 444 AGAGAATAAATCAT----TAAGCATCGGAAATAAATTTTACGCAGAAGCC 489
||| |||.|.| |.|||||.||...|||||||||.|||||.|.|
BPUM_1610___y 429 AGA----AAACCGTGCGCTTAGCATTGGTTCTAAATTTTATGCAGAGGAC 474
BSNT_04569___ 490 AGC------ATT-------GAC-----GTGGCTAAGCGCAGCACTCCTCC 521
|.| ||| ||| |||| .|||.||.|
BPUM_1610___y 475 ACCCTCGATATTCAAACACGACCAGTTGTGG---------TCACACCAC- 514
BSNT_04569___ 522 GACTCAG--CCTTGCGGTTGCAACTAA 546
||| ||.||.||||| ||||
BPUM_1610___y 515 ----CAGATCCGTGTGGTTG---CTAA 534
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.