Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02970 and BPUM_1696

See Amino acid alignment / Visit BSNT_02970 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_02970___yneK.1.24716.seq
#    -bsequence dna-align/BPUM_1696___yneK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02970___yneK-BPUM_1696___yneK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02970___yneK
# 2: BPUM_1696___yneK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity:     311/447 (69.6%)
# Similarity:   311/447 (69.6%)
# Gaps:          36/447 ( 8.1%)
# Score: 1023.0
# 
#
#=======================================

BSNT_02970___      1 ATGCTGGAA--GGATGGTTTTTATGGTTTATTCTGTTTTGGGTGATCATG     48
                     |||.|  ||  ||.||||||||.|||||.|||.|.|||||||..|..|||
BPUM_1696___y      1 ATGTT--AAGCGGCTGGTTTTTGTGGTTCATTTTATTTTGGGGTACGATG     48

BSNT_02970___     49 ATGGTAGTCTTATTATCAATCGGCGGTTTTTTCATGTTTCGAAAGTTTTT     98
                     |||.|.|..|||.|..|||||||.||.|||||.||||||||.||.|||||
BPUM_1696___y     49 ATGATCGGATTACTCGCAATCGGTGGCTTTTTTATGTTTCGCAAATTTTT     98

BSNT_02970___     99 AAAGCGTTTACCAAAAGAGGACGGCAGATCAGAGCTTGATTGGCAGGATT    148
                     |||.||.||.||.||.||.||.||.|.||||||||||||||||||||||.
BPUM_1696___y     99 AAAACGATTGCCGAAGGAAGATGGGAAATCAGAGCTTGATTGGCAGGATG    148

BSNT_02970___    149 ACTATATTGAAAACAGCAGACATTTATGGAACGATGAAAACAAACAGTTT    198
                     |.||||||.||||.|||...||..|||||...||.|||.||||||||.||
BPUM_1696___y    149 AATATATTCAAAAGAGCCTCCACCTATGGCGGGAAGAAGACAAACAGCTT    198

BSNT_02970___    199 CTAGATGAA-TTGACTGCGCCCGTGCCAGAGCTGTTCAGAGATGCAGCAA    247
                     .||.||||| |||.|| ..||.||.|||||.|||||.|||||||..||.|
BPUM_1696___y    199 TTAAATGAACTTGTCT-TACCTGTTCCAGAACTGTTTAGAGATGTCGCCA    247

BSNT_02970___    248 AAGCTAAAATCGCAGGCAAAATCGGTGAGCTTGCATTAAAAGAA-AAGGT    296
                     |||..|||||.|||||.|||||.||.|||.|.|||||||||||| |||.|
BPUM_1696___y    248 AAGAAAAAATTGCAGGAAAAATTGGCGAGTTGGCATTAAAAGAACAAGCT    297

BSNT_02970___    297 AGCAAAGATTGA-TCAGCAACTTATGATCA---AAGGCTATATTCTCGCA    342
                      ||.|..|||.| |.||  |||||  ||||   ..|||||||||.||||.
BPUM_1696___y    298 -GCCAGCATTAATTTAG--ACTTA--ATCATTCGCGGCTATATTATCGCT    342

BSNT_02970___    343 ACTCCTAAAAGAGACCATACCTTCTTAAAAAGGCATCTGCGGGACAAAAA    392
                     ||.||.||..|.||.||||..||.|||...|.||.|||.|..||.|||||
BPUM_1696___y    343 ACACCAAAGCGTGATCATAAGTTTTTATTGAAGCGTCTTCAAGAAAAAAA    392

BSNT_02970___    393 AATCG----------ATTTGGAACCTTATCAGACCCTTCTCAAATAA    429
                     .||||          ||.||.|.|.||||          |.||||||
BPUM_1696___y    393 CATCGATCATACGCCATATGAAGCTTTAT----------TAAAATAA    429


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