Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02984 and BPUM_1704
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_02984.1.24716.seq
# -bsequence dna-align/BPUM_1704___yneP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02984-BPUM_1704___yneP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02984-BPUM_1704___yneP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02984
# 2: BPUM_1704___yneP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 302/441 (68.5%)
# Similarity: 302/441 (68.5%)
# Gaps: 42/441 ( 9.5%)
# Score: 1018.5
#
#
#=======================================
BSNT_02984 1 TTGCATGTATCAAAAAAAGAAATAGAAGTGCGTTATGCAGAAACAGATCA 50
.||.|||||||.|||||||||||||||||.||||||||.||||||||.||
BPUM_1704___y 1 GTGTATGTATCTAAAAAAGAAATAGAAGTCCGTTATGCGGAAACAGACCA 50
BSNT_02984 51 AATGGGGATTGTCTATCACGCAAATTATCTTGTGTGGATGGAGGTCGGCA 100
||||||.|||||.|||||.||.||||||.|..|.||||||||.|||||||
BPUM_1704___y 51 AATGGGCATTGTGTATCATGCCAATTATTTAATCTGGATGGAAGTCGGCA 100
BSNT_02984 101 GAACGGCCTTGATTAAGGACTTAGGCTTTT--TATATAGTGATATGGAAA 148
||||.|||.|||||||.||.|||||.|||| |||..|..|.|| |||.
BPUM_1704___y 101 GAACAGCCCTGATTAAAGAATTAGGATTTTCCTATGCACAGCTA--GAAG 148
BSNT_02984 149 AAAAAGGCATTCTGTCCCCAGTCGTTGATATCAATATTTCC--------T 190
.|.|||||..|||..|.||.|| ||| |.||||.| |
BPUM_1704___y 149 CAGAAGGCGCTCTTGCACCCGT------TAT--AGATTTGCAGGTGAAAT 190
BSNT_02984 191 ATAAAAAGCCGCTTCATTACGGAGAAACCGCGGTTGTACATACATGGATA 240
|||||||.||.||.|..|||||.|||||.||....||.|||||.|||||.
BPUM_1704___y 191 ATAAAAAACCACTCCTGTACGGTGAAACAGCAACAGTTCATACTTGGATT 240
BSNT_02984 241 GAGGAATATAACGGCTTTAAAACCGTCTATGGTTATCACATTTATAATCC 290
||.|||||.||.||..|.|||||.||.|||||.||..|.|||.|.||
BPUM_1704___y 241 GAAGAATACAATGGACTCAAAACGGTATATGGCTACGAAATTCAAAA--- 287
BSNT_02984 291 GGCC-GGTG-------AGCTTTCCATCAAAGCCACCTCATCTCATATTTG 332
||| |.|| || |.||.|.||..||..|.||.|||||.||
BPUM_1704___y 288 -GCCTGATGGAAAAACAG----CGATTACAGGGACAACCTCGCATATCTG 332
BSNT_02984 333 TGTGGATAAAGAAAGCTTTAAGCCAATTCAATTCCGCAAAGCTTTTCCTG 382
|||.||.|||||.|.|||||..||.||||||||..|.|||||.|||||||
BPUM_1704___y 333 TGTAGACAAAGACACCTTTAGACCTATTCAATTTAGAAAAGCATTTCCTG 382
BSNT_02984 383 ATTGGCACACATCATATGAAAAGGCCAAAAAATAG------ 417
..|||||||.|..|||||||.||.|.||.||..||
BPUM_1704___y 383 CCTGGCACAAAGTATATGAACAGTCGAAGAAGCAGGTTTAA 423
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