Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03017 and BPUM_1783
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_03017.1.24716.seq
# -bsequence dna-align/BPUM_1783___pycAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03017-BPUM_1783___pycAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03017-BPUM_1783___pycAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03017
# 2: BPUM_1783___pycAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 156/228 (68.4%)
# Similarity: 156/228 (68.4%)
# Gaps: 18/228 ( 7.9%)
# Score: 488.5
#
#
#=======================================
BSNT_03017 1 ATG---ACGGTTAGCATACAAATGGCAGGAAACCTGTGGAAAGTCCACGT 47
||| ||.||.|..|||||||||||.||||||.|.|||||..|.|..||
BPUM_1783___p 1 ATGAAAACAGTCACGATACAAATGGCGGGAAACTTATGGAAGCTTCTTGT 50
BSNT_03017 48 CAAAGCCGGCGACCAAAT-CGAAAAGGGCCAGGAGGTAGCCATTTTGGAA 96
.|||...|||||..||.| |.||||||| ||||||||.||.|||||||||
BPUM_1783___p 51 GAAACAAGGCGATGAAGTGCAAAAAGGG-CAGGAGGTCGCTATTTTGGAA 99
BSNT_03017 97 TCGATGAAAATGGAAATCCCGATCGTTGCAGATAGAAGCGGAATCGTAAA 146
||.|||||||||||.||.||.||.||.||||| |||..||| .|..||..
BPUM_1783___p 100 TCAATGAAAATGGAGATTCCTATAGTGGCAGA-AGAGACGG-GTTTTATT 147
BSNT_03017 147 AG--AAGTCAAAAAAAATGAAGGAGACTTTGTAAATGAAGGAGACGTACT 194
|| ||||..|.|||...||.|||||.|||||..|||||||.||.||.||
BPUM_1783___p 148 AGCAAAGTGTATAAAGCAGAGGGAGAATTTGTCGATGAAGGGGAGGTTCT 197
BSNT_03017 195 GCTCGAACTGAGCAATTCCACTCAATAA 222
.||.||.||| ||..||||.
BPUM_1783___p 198 TCTAGAGCTG---------ACAGAATAG 216
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