Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02898 and BPUM_1832
See
Amino acid alignment /
Visit
BSNT_02898 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_02898___xynP.1.24716.seq
# -bsequence dna-align/BPUM_1832___xynP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02898___xynP-BPUM_1832___xynP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02898___xynP-BPUM_1832___xynP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02898___xynP
# 2: BPUM_1832___xynP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1411
# Identity: 1059/1411 (75.1%)
# Similarity: 1059/1411 (75.1%)
# Gaps: 38/1411 ( 2.7%)
# Score: 3820.5
#
#
#=======================================
BSNT_02898___ 1 ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATA 50
|||.|.|||||.|||.|||||||||||.|.|||..|||||||||.|||||
BPUM_1832___x 1 ATGGTTAGTGAGAATTTAAAGAAGATTCGTATGTCTGAAAAAGTGGGATA 50
BSNT_02898___ 51 TGCGTCTGGAGATTTTGCTTGTAATTTAATTTATGCAACAGTGTCTACGT 100
|||.||.||.|||||.||.||||||||.|||||.|||||.||.|||||||
BPUM_1832___x 51 TGCTTCAGGGGATTTCGCATGTAATTTGATTTACGCAACTGTCTCTACGT 100
BSNT_02898___ 101 ATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCC 150
||||.||.||.||||||||||||||.|..||||||||.|||||||||||.
BPUM_1832___x 101 ATCTATTATTTTTCTATACAGATGTGTACGGTTTATCAGCAGCAGCAGCA 150
BSNT_02898___ 151 GGTACTATGTTTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTT 200
||.||.||||||||.||.|||.|....||.||.||.||.||.|||||.||
BPUM_1832___x 151 GGGACGATGTTTTTGGTTGTTCGCGCTATAGATGCGCTTGCAGATCCATT 200
BSNT_02898___ 201 TATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGACGCTTTAGAC 250
|||.||..||.|.||.|||.|.|||||||||.|.|||||..|.||.||||
BPUM_1832___x 201 TATTGGTGCATTGGTGGACCGGACGAACAGCCGTTTTGGTAGATTCAGAC 250
BSNT_02898___ 251 CGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGT 300
|.|||.|.||||||||.||.|||||.||||||.||||.||.||.||.||.
BPUM_1832___x 251 CTTATTTGTTATTCGGCGCCTTTCCTTTTGTCGTACTTGCCATTCTTTGC 300
BSNT_02898___ 301 TTTACAACACCAGACTTTTCGGATATGGGGAAATTAGTATATGCCTATAT 350
|||||||||||.||||||||.||.|||||.|||.|..|.||||||||.||
BPUM_1832___x 301 TTTACAACACCTGACTTTTCCGAAATGGGTAAACTCATTTATGCCTACAT 350
BSNT_02898___ 351 AACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG 400
.||.||||||||..|.|||||||||||||||...||.||||||||.||||
BPUM_1832___x 351 CACGTATGTTGGTCTATCGCTTACATACACATTCATCAACGTTCCTTATG 400
BSNT_02898___ 401 GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATA 450
|.||.||||||||.||||||||.||||||||.|||||.|||||.|||||.
BPUM_1832___x 401 GTGCTTTAACTTCCGCAATGACAAGAAATAACCAAGAGGTTGTCAGTATT 450
BSNT_02898___ 451 ACTTCTGTTCGCATGTTATTTGCGAATCTTGGGGGACTTGTCGTTGCATT 500
||.||.|||||.|||.|.|||||.|||.|.||.||.||.||.||.||.||
BPUM_1832___x 451 ACGTCCGTTCGTATGGTGTTTGCCAATTTAGGCGGTCTGGTTGTGGCTTT 500
BSNT_02898___ 501 TTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCA--ACGA 548
|||||||||.||.||.||..|.|.||||||.|||||..|.||.| || |
BPUM_1832___x 501 TTTTGTTCCGTTTCTTGCGACCTTTTTAAGTGATACGACAGGAAATAC-A 549
BSNT_02898___ 549 GTCTCTTGGCTGGCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGT 598
| |.||.||||||||..|.||.||||.|.||.|.||..|..|.||| ||.
BPUM_1832___x 550 G-CACTCGGCTGGCAGATGACGATGGCTTTTCTCGGCGTTCTTGGC-GGC 597
BSNT_02898___ 599 GCCTT-TTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCACTCTTCA 647
||.|| .|.||.||.|||||||||||||||||.||.||.|||||.|||||
BPUM_1832___x 598 GCATTACTCATTTTCTGTTTTAAAAGCACAAATGAACGTGTCACGCTTCA 647
BSNT_02898___ 648 AAAATCCGAAGAAAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTG 697
|||..|.||.|||||.||||||||.|..|||||.||||..|||||.||.|
BPUM_1832___x 648 AAAGCCAGAGGAAAAGATTAAATTCAGTGATATCTTTGTTCAGTTACGAG 697
BSNT_02898___ 698 TTAATCGTCCACTTGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGA 747
|.|||||.||.||.|||||||||||||||||||||||||||||||||||.
BPUM_1832___x 698 TGAATCGCCCGCTAGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGT 747
BSNT_02898___ 748 GTGAATTCCATCAGTAATTCGGTTGGCATTTATTACGTAACATATAACTT 797
|||||.||.|||||.||.||.|||||.||.|||||.||.||.||||||.|
BPUM_1832___x 748 GTGAACTCGATCAGCAACTCTGTTGGGATCTATTATGTGACGTATAACCT 797
BSNT_02898___ 798 AGAAAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTGCCCG 847
.|..|||||.|||||.|||||.||||||||..|.||.||.|||.|.||.|
BPUM_1832___x 798 TGGCAGAGAAGATTTAGTGAAATGGTACGGACTCATTGGCAGTCTACCAG 847
BSNT_02898___ 848 CTT---TGGT-CATTTTACCGTTTATTCCAAGGCTTCATCAA-TTTTTGG 892
||| |||| | |.|||||||||||||.|||.|| ||| |||||.|
BPUM_1832___x 848 CTTTAATGGTGC----TGCCGTTTATTCCAAAGCTGCA-CAAGTTTTTAG 892
BSNT_02898___ 893 GGAAGAAGAAATTACTAAACTATGCATTATTACTGAATATTATCGG-CCT 941
|.|||||||||.|.||.||.|||.|.||||..|||||||||.|.|| |.|
BPUM_1832___x 893 GTAAGAAGAAACTGCTGAATTATTCTTTATCGCTGAATATTGTGGGTCTT 942
BSNT_02898___ 942 CTTAGCTTTACTGTTTGCT-CCGCCAAGT--AAT----GTATACCTCATA 984
||| |||||||| |.||.| ||.||.||| ||| .||..|||.|
BPUM_1832___x 943 CTT-GCTTTACT-TGTGATACCACCGAGTCAAATCACATTAATCCTGA-- 988
BSNT_02898___ 985 CTTGTCTG--TCGATTAATCGCTGCTGCTGGAAGTCTCACTGCCGGGGGA 1032
||.||.| ||| |.||||||||.||.|||.|.||.|||||.|..
BPUM_1832___x 989 -TTTTCAGGCTCG-----TTGCTGCTGCGGGGAGTATTACAGCCGGTGCT 1032
BSNT_02898___ 1033 TATATGTGGGCGCTTATTCCTGAAACAATTGAATATGGAGAGTACAGGAC 1082
||.||||||||.||.||||||||.||..||||||||||.||.||.|..||
BPUM_1832___x 1033 TACATGTGGGCACTCATTCCTGAGACCGTTGAATATGGCGAATATAAAAC 1082
BSNT_02898___ 1083 TGGGAAAAGAATGGGTGGGCTCATTTACGCTATCATCGGATTTTTCTTTA 1132
|||.|||||.|||||.||.||.||.|||||..||||.||.||||||||||
BPUM_1832___x 1083 TGGAAAAAGGATGGGCGGACTGATCTACGCAGTCATTGGGTTTTTCTTTA 1132
BSNT_02898___ 1133 AGTTTGGTATGGCCTTAGGAGGAGTTGTTCCGGGTCTGGTTCTTGATAAG 1182
|.|||||.|||||.|||||.|||.||||||||||.||.||.||.|||...
BPUM_1832___x 1133 AATTTGGAATGGCATTAGGCGGAATTGTTCCGGGGCTTGTACTCGATCGA 1182
BSNT_02898___ 1183 TTTGGATATGTAGCAAATCAGGCACAAACCCCGGCGGCATTAATGGGGAT 1232
|||||.|||||.||||||||...|||.||.||.|..|||||..|.||.||
BPUM_1832___x 1183 TTTGGCTATGTTGCAAATCAAATACAGACGCCAGAAGCATTGCTTGGCAT 1232
BSNT_02898___ 1233 TTTAATTACAACAACGATTATTCCCGTGTTCTTGCTTG-TTCTAGCTTTA 1281
||||.|.||...|||..|.|||||.||.|.|||| ||| ||.||||..|.
BPUM_1832___x 1233 TTTACTCACGGTAACAGTGATTCCTGTATGCTTG-TTGATTTTAGCGATG 1281
BSNT_02898___ 1282 ATTGATATTAATTTCTATAACTTAGATGAGAAAAAATATAAAAACATGGT 1331
||||||||||||||.||||||.|||||||..||||..|..||.|..|.||
BPUM_1832___x 1282 ATTGATATTAATTTTTATAACCTAGATGAAGAAAAGCACCAAGAAGTCGT 1331
BSNT_02898___ 1332 TCGAGAATTAGAGAATAGAGACAAAGTTTATTTGGATCATATTGATGATT 1381
..|.||..|.||||||||.||..||||.|||.|.||||||||.|||||||
BPUM_1832___x 1332 GAGGGAGCTTGAGAATAGGGATCAAGTATATATCGATCATATGGATGATT 1381
BSNT_02898___ 1382 TCACTATTTAG 1392
|.|..||.|||
BPUM_1832___x 1382 TTAAAATGTAG 1392
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.