Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03130 and BPUM_1851
See
Amino acid alignment /
Visit
BSNT_03130 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_03130___yocH.1.24716.seq
# -bsequence dna-align/BPUM_1851___yocH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03130___yocH-BPUM_1851___yocH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03130___yocH-BPUM_1851___yocH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03130___yocH
# 2: BPUM_1851___yocH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 904
# Identity: 598/904 (66.2%)
# Similarity: 598/904 (66.2%)
# Gaps: 152/904 (16.8%)
# Score: 1965.5
#
#
#=======================================
BSNT_03130___ 1 ATGAAGAAGACGATTATGTCCTTTGTGGCAGTTGCTGCACTTTCAACAAC 50
|||||||||||.|||||||||||.||.||.|||||.|||.|.||||||||
BPUM_1851___y 1 ATGAAGAAGACTATTATGTCCTTGGTTGCTGTTGCAGCAATCTCAACAAC 50
BSNT_03130___ 51 TGCATTCGGAGC---TCACGCTTCTGCAAAAGAAATTACGGTGCAAAAGG 97
.|||||.||||| .||.|||||||||||.|||||.||.||.||.||.|
BPUM_1851___y 51 AGCATTTGGAGCACAGCAAGCTTCTGCAAAGGAAATCACTGTACAGAAAG 100
BSNT_03130___ 98 GTGATACGCTCTGGGGAATCTCTCAGAAAAATGGAGTGAACCTAAAGGAC 147
|||||||.||.|||||||||||.||.|||||||..|||...|||||||||
BPUM_1851___y 101 GTGATACACTTTGGGGAATCTCACAAAAAAATGATGTGTCTCTAAAGGAC 150
BSNT_03130___ 148 TTAAAAGAATGGAACAAGTTAACTTCTGATAAAATCATTGCAGGAGAAAA 197
.||||.|..||||||||.|||.||.||||||..|||..||..||.||.||
BPUM_1851___y 151 CTAAAGGGTTGGAACAATTTATCTACTGATATGATCTATGTGGGTGATAA 200
BSNT_03130___ 198 ACTGACCATTTCTTCAGAAGAAACAAC-CACGACTGGGCAATATACAATT 246
|.||||.||.||||||.||||.|.||| ||.|| |||.|||| ||.|
BPUM_1851___y 201 ATTGACAATCTCTTCAAAAGAGAAAACTCAGGA----GCAGTATA-AAGT 245
BSNT_03130___ 247 ---AAAGCGGGAGATACGCTTTCT--AAGATTGCTCAAAAATTCGGCACG 291
.|||.||||.|..| ||| ||.||.|||||||||||
BPUM_1851___y 246 CCAGAAGGGGGACAGCC----TCTGGAAAATCGCTCAAAAATT------- 284
BSNT_03130___ 292 ACA----GTCAACAACCTGA----AAGT-TTGGAATAACTTAAGCTCTGA 332
|| |||||..|.| || |||| ||||||||||||||.|||.||
BPUM_1851___y 285 -CAATGTGTCAATTAGC-GATATTAAGTCTTGGAATAACTTAAACTCAGA 332
BSNT_03130___ 333 CATGATCTAT-GCTGGATCAACTCTTTCAGTAAAAG-GT--CAGGCAACA 378
.||.|| ||| |.|||.|||||.|| ||| || |.|||
BPUM_1851___y 333 TATAAT-TATGGTTGGTTCAACACT--------AAGTGTTGCTGGC---- 369
BSNT_03130___ 379 GCAGCAAA-CACAGCTAC--TGAGAATGCGCAAACAAACGCACCTC--AA 423
|||| |.|.|||.| |.|| ||| ||
BPUM_1851___y 370 ----CAAAGCTCGGCTCCGGTAAG-------------------CTCAGAA 396
BSNT_03130___ 424 GCTGCGCCAAAACAAGAGGCTGTGCAAAAAGAGCAACCTAAAC--AAGAA 471
.|||..|.||||||.||..||||.||||||||||||.| ||| ||.||
BPUM_1851___y 397 CCTGTTCAAAAACAGGAACCTGTCCAAAAAGAGCAAAC--AACGAAAAAA 444
BSNT_03130___ 472 GCTG-TACAACAGCAACCTAAACAAGAAACAAAAGCTGAGGCAGA---AA 517
|||| | ||||||.|.||||| ||||.|.||||| |.
BPUM_1851___y 445 GCTGCT----------CCTAAAAAGGAAAC---AGCTAAAGCAGAATCAT 481
BSNT_03130___ 518 CTTCTGTTA-ACACAGAAGAGAAGGCTGTTCAATCAAATACAAATAATCA 566
||||||.|| .||.|| |||.||
BPUM_1851___y 482 CTTCTGCTAGTCAGAG----------TGTACA------------------ 503
BSNT_03130___ 567 AGAAGCTTCAAAAGAACTAACAGTTACTGCTACTGCTTACACTGCTAACG 616
|||||||.|.||.|||||.|||||.|||||.||.||.||.|
BPUM_1851___y 504 ---------AAAAGAAATGACTGTTACGGCTACGGCTTATACAGCAAATG 544
BSNT_03130___ 617 ACGGCGGCATTTCCGGCGTTACAGCTACAGGCATTGACTTAAATAAGAAC 666
|.||.|||||.||.||..|.||.||.|||||..|..|||||||.||.|||
BPUM_1851___y 545 ATGGTGGCATCTCAGGTATCACTGCAACAGGGGTAAACTTAAACAAAAAC 594
BSNT_03130___ 667 CCGAACGCGAAAGTTATTGCGGTTGATCCTAATGTAATTCCGCTAGGTTC 716
||.||.||.|||||.|||||.||.|||||||.|||.|||||..||||...
BPUM_1851___y 595 CCAAATGCAAAAGTAATTGCAGTAGATCCTAGTGTCATTCCATTAGGAAG 644
BSNT_03130___ 717 TAAAGTTTATGTTGAAGGCTACGGGGAAGCAACAGCAGGAGACACTGGCG 766
|||.||||||||||||||||||||.|||||.|..||||.|||.|||||||
BPUM_1851___y 645 TAAGGTTTATGTTGAAGGCTACGGTGAAGCCATCGCAGCAGATACTGGCG 694
BSNT_03130___ 767 GCGCTATTAAAGGAAATAAAATCGACGTATTTGTACCAAGTAA-----AA 811
||||.||||||||.||.|||||.||.|||..|||||||||.|| ||
BPUM_1851___y 695 GCGCAATTAAAGGTAACAAAATTGATGTACATGTACCAAGCAAATCCCAA 744
BSNT_03130___ 812 GTGATGCATCTAATTGGGGCGTCAAAACTGTAAATGTTAAAAT-CTTAAA 860
|.|| ..|||||||||||.|||.|.||.||.||.|||.| ||| ||
BPUM_1851___y 745 GCGA-----AAAATTGGGGCGTAAAATCAGTCAAAGTAAAAGTACTT-AA 788
BSNT_03130___ 861 CTAA 864
|||.
BPUM_1851___y 789 CTAG 792
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.