Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03144 and BPUM_1856
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_03144___yozC.1.24716.seq
# -bsequence dna-align/BPUM_1856___yozC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03144___yozC-BPUM_1856___yozC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03144___yozC-BPUM_1856___yozC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03144___yozC
# 2: BPUM_1856___yozC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 157/220 (71.4%)
# Similarity: 157/220 (71.4%)
# Gaps: 23/220 (10.5%)
# Score: 548.5
#
#
#=======================================
BSNT_03144___ 1 ATGATTCATAAAAATTGGCTTGAAAAAG----AAACAATTAAAA-AAGTA 45
|||||.|||.||||.|||| |||.| |||| .|||||| |||||
BPUM_1856___y 1 ATGATCCATCAAAACTGGC----AAACGGCTCAAAC-GTTAAAACAAGTA 45
BSNT_03144___ 46 AAGTGTGTGCAGACAAACGCAAAAAAATATATCGTAAACCGCGTTTTAAC 95
||.|||.|.||.||.||.||.|||||||||||.||..||||.|...|||
BPUM_1856___y 46 AAATGTATACATACGAATGCGAAAAAATATATGGTCGACCGTGCACTAA- 94
BSNT_03144___ 96 GCCG--GGAAAAGAATATGAAGTAAAAAATGAAACAGAGGAGTTTCTCTT 143
||| ||.|....|||||||||.||||||||||||||.||.||.||.||
BPUM_1856___y 95 -CCGTTGGCAGCACATATGAAGTGAAAAATGAAACAGAAGAATTCCTGTT 143
BSNT_03144___ 144 TGTGGTCGACAATACGAATAAAGTCGGCGGCTATTATAAAGAATACTTCG 193
|||.||.||.|||||...||||||||||||.|||||||||||.||.||||
BPUM_1856___y 144 TGTCGTTGATAATACAGGTAAAGTCGGCGGGTATTATAAAGAGTATTTCG 193
BSNT_03144___ 194 AAGAGATGT------AA--- 204
||||.||.| ||
BPUM_1856___y 194 AAGACATTTCTGCTGAATGA 213
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