Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03246 and BPUM_1911
See
Amino acid alignment /
Visit
BSNT_03246 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_03246___ilvA.1.24716.seq
# -bsequence dna-align/BPUM_1911___ilvA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03246___ilvA-BPUM_1911___ilvA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03246___ilvA-BPUM_1911___ilvA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03246___ilvA
# 2: BPUM_1911___ilvA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1290
# Identity: 948/1290 (73.5%)
# Similarity: 948/1290 (73.5%)
# Gaps: 42/1290 ( 3.3%)
# Score: 3357.5
#
#
#=======================================
BSNT_03246___ 1 ATGAAACCGTTGCTTAAAGAAAACTCTCTCATCCAAGTGAAAGACATTTT 50
||||||||||||||.|||||||||.|.||.||.|||||||||||.|||||
BPUM_1911___i 1 ATGAAACCGTTGCTCAAAGAAAACACGCTAATTCAAGTGAAAGATATTTT 50
BSNT_03246___ 51 GAAGGCTCACCAAAACGTAAAGGACGTTGTCATTCACACACCTTTGCAGA 100
.|||||.||.|||||..|.|||||.||.||||||||.||||||.|.||.|
BPUM_1911___i 51 AAAGGCCCATCAAAATTTGAAGGATGTAGTCATTCATACACCTCTTCAAA 100
BSNT_03246___ 101 GGAATGACAGACTTTCTGAGAGATATGAATGCAATATCTATTTAAAACGC 150
..|||||..||||||||||..||||||||||.|||.||||.||||||.|.
BPUM_1911___i 101 AAAATGAGCGACTTTCTGAACGATATGAATGTAATGTCTACTTAAAAAGA 150
BSNT_03246___ 151 GAAGACTTGCAAGTTGTCAGATCTTTTAAGCTCAGAGGGGCTTATCATAA 200
||.|||.|.|||||.||..|.||.|||||..|.|||||.||||.|.||||
BPUM_1911___i 151 GAGGACCTTCAAGTAGTTCGTTCCTTTAAATTAAGAGGCGCTTTTAATAA 200
BSNT_03246___ 201 AATGAAACAGCTTTCCAGCGAGCAGAC-AGAGAACGGAGTTGTGTGTGCA 249
|||||..||||||.|.|..|| .|.|| |.|.|||||..||||.||.|||
BPUM_1911___i 201 AATGAGCCAGCTTCCAAAAGA-TAAACTAAAAAACGGCATTGTCTGCGCA 249
BSNT_03246___ 250 AGTGCCGGAAACCACGCTCAAGGTGTGGCATTTTCGTGTAAACATCTTGG 299
|||||.|||||.|||||.|||||.||.||.|.|||.||||||.||||.||
BPUM_1911___i 250 AGTGCAGGAAATCACGCACAAGGGGTTGCCTATTCTTGTAAATATCTAGG 299
BSNT_03246___ 300 CATTCACGGAAAAATTTTTATGCCGTCTACTACACCGAGACAAAAAGTAT 349
.||.|||||||||||.||||||||..||||.|||||.||.||||||||||
BPUM_1911___i 300 TATCCACGGAAAAATCTTTATGCCTGCTACGACACCAAGGCAAAAAGTAT 349
BSNT_03246___ 350 CTCAAGTTGAACTATTCGGAAAAGGATTTATCGACATTATTTTGACAGGC 399
|||||||.||.||.||||||||||.||.|.|.||.|||||.||.||.||.
BPUM_1911___i 350 CTCAAGTGGAGCTTTTCGGAAAAGAATATGTTGAAATTATCTTAACCGGA 399
BSNT_03246___ 400 GATACGTTTGACGACGCGTATAA--AAGCGCTGCTGAATGCTGTGAGGCG 447
||||||||.||.||..|.|||.| ||||..|| .|||||.|.||.|..
BPUM_1911___i 400 GATACGTTCGATGATTCATATCATGAAGCAGTG--AAATGCGGAGATGAA 447
BSNT_03246___ 448 GAATCTCG-GACGTTTATCCATCCGTTCGATGATCCGGATGTGATGGCCG 496
|||...|| || .||||||||||||||.||||||..||||||||||||.|
BPUM_1911___i 448 GAAAAGCGTGA-ATTTATCCATCCGTTTGATGATTTGGATGTGATGGCAG 496
BSNT_03246___ 497 GACAGGGAACG-CTCGCAGTCGAGATTTTAAACGACATTGATACAGAACC 545
||||.|||||| || ||.||.||.||.|||||.||.||.||....||.||
BPUM_1911___i 497 GACAAGGAACGACT-GCTGTAGAAATATTAAATGATATCGAAGTGGAGCC 545
BSNT_03246___ 546 GCATTTTCTTTTTGCAAGTGTCGGTGGCGGCGGCCTTCTCTCTGGGGTAG 595
.||.|||.|.|||||||||||.||.||.||.||..|..|.|||||.||.|
BPUM_1911___i 546 TCACTTTTTATTTGCAAGTGTTGGAGGTGGAGGTTTGTTATCTGGAGTGG 595
BSNT_03246___ 596 GTACATATTTGAAAAACGTGTCTCCTGATAC--AAAGGTAATTGCTGTTG 643
||||||||.|.|||||..|..|.||.||.|| ||| |.||.||.||.|
BPUM_1911___i 596 GTACATATATTAAAAATATCGCCCCAGAAACCGAAA--TCATCGCAGTCG 643
BSNT_03246___ 644 AGCCGGCGGGAGCGGCAT-----CCTACTT----TGAATCAAACAAAGCT 684
|.|||...||.||.|||| |.|.||| ||| |||
BPUM_1911___i 644 AACCGCTTGGCGCAGCATCACTCCATGCTTCCCATGA-------AAA--- 683
BSNT_03246___ 685 GGGC-ATGTCGTCACACTTGATAAAATTGATAAGTTTGTAGATGGTGCGG 733
|||| |.||.||.|||||||||...|||||||||||||||||.||.||.|
BPUM_1911___i 684 GGGCAAGGTTGTGACACTTGATTCCATTGATAAGTTTGTAGACGGAGCAG 733
BSNT_03246___ 734 CTGTTAAAAAAATTGGCGAAGAAACCTTCCGGACGCTGGAAACTGTCGTT 783
|.|||.|....|||||||||.|.||.||.....|.||..|..||||.|||
BPUM_1911___i 734 CGGTTCAGCGGATTGGCGAAAAGACGTTTACATCTCTACAGTCTGTTGTT 783
BSNT_03246___ 784 GATGACATTCTCCTTGTGCCTGAAGGAAAAGTATGTACATCCATTCTTGA 833
|||.|.|||...|||||.||||||||.||||||||||||.|||||.|.||
BPUM_1911___i 784 GATAAAATTAGTCTTGTACCTGAAGGGAAAGTATGTACAACCATTTTAGA 833
BSNT_03246___ 834 ATTATATAACGAATGTGCGGTTGTTGCTGAACCGGCTGGAGCTCTTTCTG 883
..|.|||||..||||||||.||||.||.||.|||||.||.||.|||.|..
BPUM_1911___i 834 GCTTTATAATCAATGTGCGATTGTAGCAGAGCCGGCAGGTGCACTTCCGA 883
BSNT_03246___ 884 TCGCAGCGCTTGATTTGTACAAGGATGAAATTAAAGGGAAAAACGTGGTG 933
||||||||||||||....||...||.||.||||||||||||||.||.||.
BPUM_1911___i 884 TCGCAGCGCTTGATGCTCACCGCGAGGAGATTAAAGGGAAAAATGTTGTC 933
BSNT_03246___ 934 TGTGTGGTAAGCGGGGGCAATAACGATATCGGAAGAATGCAGGAAATGAA 983
|||.|.||.||.||.||.|||||.||.||.||.||||||||.|||||.||
BPUM_1911___i 934 TGTATTGTCAGTGGAGGAAATAATGACATTGGCAGAATGCAAGAAATCAA 983
BSNT_03246___ 984 GGAGCGTTCCTTGATTTTTGAAGGTCTTCAGCATTATTTTATCGTCAACT 1033
.||.||.||..||||||.||||||.|||||.||||||||.||.|||||.|
BPUM_1911___i 984 AGAACGGTCGATGATTTATGAAGGGCTTCAACATTATTTCATTGTCAATT 1033
BSNT_03246___ 1034 TTCCGCAAAGAGCGGGGGCGCTCCGCGAATTTCTTGACGAAGTCCTCGGA 1083
|||||||||||||.||.|||||.||.||||||.|.||.|||||..|.||.
BPUM_1911___i 1034 TTCCGCAAAGAGCAGGTGCGCTTCGGGAATTTTTAGATGAAGTATTAGGG 1083
BSNT_03246___ 1084 CCGAATGATGACATTACAAGGTTTGAATATACGAAGAAAAATAATAAAAG 1133
||.||||||||.|||.|..|.||||||||||||||.||.|||||...|||
BPUM_1911___i 1084 CCAAATGATGATATTTCCCGCTTTGAATATACGAAAAAGAATAACCGAAG 1133
BSNT_03246___ 1134 CAATGGACCTGCTCTTGTCGGCATCGAGCTGCAGAACAAAGCCGATTATG 1183
|||.||||||||.|||||.||||||||..||.||.|.|.||..||.|||.
BPUM_1911___i 1134 CAAAGGACCTGCGCTTGTTGGCATCGAATTGAAGGAAAGAGATGACTATA 1183
BSNT_03246___ 1184 GGCCGCTGATTGAACGGATGAACAAAAAACCGTTTCATTATGTAGAGGTG 1233
.|.||||.||||||||||||||.||||||...||.||||||||.||.|||
BPUM_1911___i 1184 CGGCGCTCATTGAACGGATGAATAAAAAAGGATTCCATTATGTTGAAGTG 1233
BSNT_03246___ 1234 AACAAGGATGAGGACTTGTTCC----ATTTGCTAATCTAA 1269
||.||.|||.|.||.||.|||| |||| ||.||.
BPUM_1911___i 1234 AATAAAGATCAAGATTTATTCCACCTATTT----ATTTAG 1269
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.