Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03267 and BPUM_1927
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_03267.1.24716.seq
# -bsequence dna-align/BPUM_1927___metA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03267-BPUM_1927___metA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03267-BPUM_1927___metA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03267
# 2: BPUM_1927___metA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 686/933 (73.5%)
# Similarity: 686/933 (73.5%)
# Gaps: 51/933 ( 5.5%)
# Score: 2411.5
#
#
#=======================================
BSNT_03267 1 TTGCCTATTAATATACCAACACACCTGCCGGCAAAACAGGTGCTTGAAAG 50
||||||||.||.||||||...||.||||||||||||||..|.||.||.||
BPUM_1927___m 1 TTGCCTATAAACATACCAGTTCATCTGCCGGCAAAACAAATACTAGAGAG 50
BSNT_03267 51 TGAACAGATATTTGTAATGGATGAAAGCAGAGCATTTCATCAGGATATCC 100
.|||.|.||.||.||.||||||||.|..||.|||||..|.||.|||||||
BPUM_1927___m 51 CGAAAACATTTTCGTCATGGATGAGACAAGGGCATTCAAGCAAGATATCC 100
BSNT_03267 101 GGCCGCAAAAAATTATTATATTAAATTTGATGCCGAAAAAAATCCAAACA 150
|.||....||.||..|.||.||||||||.|||||.||||||||.|||||.
BPUM_1927___m 101 GTCCTTTGAATATCGTGATCTTAAATTTAATGCCAAAAAAAATACAAACT 150
BSNT_03267 151 GAGACTCAGCTTCTCAGATTGCTTGGAAATTCGCCTTTACAGGTTCATTT 200
||.||.|||||.||||||.||||.||||||||.||||||||.||..|.||
BPUM_1927___m 151 GAAACGCAGCTACTCAGAATGCTCGGAAATTCTCCTTTACAAGTGTACTT 200
BSNT_03267 201 CACATTTTTAATCCCAAGCACACACACGCCGAAAAATACTGCGAGAGAAC 250
.||.||||||||.|||||.||.||.||.|||||.|||||..|||||||.|
BPUM_1927___m 201 TACTTTTTTAATTCCAAGTACGCATACACCGAAGAATACGTCGAGAGAGC 250
BSNT_03267 251 ACCTTGACGAATTTTACACGACTTTTTCCAAT--ATCCGTCACAAGAGGT 298
|.||.||.||||||||.|||||.||| .||| ||.||.||.||.|..|
BPUM_1927___m 251 ATCTAGATGAATTTTATACGACCTTT--GAATCGATTCGCCATAAAAAAT 298
BSNT_03267 299 TTGACGGCATGATTATCACCGGTGCGCCGATCGAGCATTTGGCGTTTGAA 348
||||.||.|||||.|||||.||.||.||.||.||||||||.||.||||||
BPUM_1927___m 299 TTGATGGAATGATCATCACAGGCGCACCAATTGAGCATTTAGCTTTTGAA 348
BSNT_03267 349 GAGGTTTCATATTGGGAAGAGCTCAAGGAAATCATGGAGTGGAGCAAAAC 398
||.||.||.||||||.|||||||..||||.||..||||.|||||.|||||
BPUM_1927___m 349 GAAGTATCCTATTGGAAAGAGCTGCAGGAGATTTTGGACTGGAGTAAAAC 398
BSNT_03267 399 AAATGTCACTTCAAC-CTTGCATATTTGCTGGGGTGCTCAAGCAGGTTTG 447
.|||||.||.||.|| ||| ||.||||||||||||||.||.|||||..||
BPUM_1927___m 399 GAATGTGACGTCTACTCTT-CACATTTGCTGGGGTGCACAGGCAGGCCTG 447
BSNT_03267 448 TACTACCATTACGGTGTTGAAAAAATTCAAA--TGCCGA-AAAAAATCTT 494
||..|||||||.|||.||||.|||| ||||| |||||| ||.||| ||
BPUM_1927___m 448 TATCACCATTATGGTATTGAGAAAA-TCAAACTTGCCGAGAAGAAA--TT 494
BSNT_03267 495 CGGTGTGTTCGAACATACCGTTCTT-TCA-----AAACACGAAAGATTGG 538
.|||||.||.||.|| |||| |.| |||.|.||||||||.|
BPUM_1927___m 495 TGGTGTATTTGAGCA------TCTTGTGAAAGAGAAAAAAGAAAGATTAG 538
BSNT_03267 539 TAAGAGGTTTTGACGAGCTATACTACGTGCCGCATTCCCGGCATACAGAT 588
|.||||||||.||.||..|||||||.||.||.|||||..|||||||||||
BPUM_1927___m 539 TCAGAGGTTTCGATGAATTATACTATGTCCCACATTCGAGGCATACAGAT 588
BSNT_03267 589 ATAAATATGGAACAGCTT--CAAGCAGTGCCCGATTTAAACATTCTT-AC 635
||.||||..||||| .|| .||.|| .|||..||||.|| |.|.|| |.
BPUM_1927___m 589 ATTAATACAGAACA-ATTAAAAAACA-CGCCGAATTTGAA-AGTATTGAG 635
BSNT_03267 636 CGCATCAAAGGAAGCCGGGGTTTGCTTAATTGTGTCAAAAGACGAAAAAC 685
.|..||..|.|||||.||.|||||.||||||||.|||.|.||.||.||||
BPUM_1927___m 636 TGTCTCTGAAGAAGCGGGAGTTTGTTTAATTGTTTCAGATGATGATAAAC 685
BSNT_03267 686 AAGTCTTTTTGACAGGGCACCCTGAATATGATACAAATACGCTTCTT--- 732
||||.|||||.||.||.||.|||||||||||||||.|.|| .||
BPUM_1927___m 686 AAGTATTTTTAACTGGACATCCTGAATATGATACAGACAC----ATTGAA 731
BSNT_03267 733 -CAAGAGTATGAAAGAGATTTG--GAACGAAACCTTTCTACTGTCGAGGA 779
||.||.||||||||||||||| |||.|| |..|||.|||.|..|
BPUM_1927___m 732 GCAGGAATATGAAAGAGATTTGTTGAAGGA-----TGATACAGTCAAAAA 776
BSNT_03267 780 GCCTAAACATTATTTTGCAAAAGGCAGCAACG----AG--CCAGTGAATC 823
.|||...||.||||||..|.|||...|..||| || ||||||||||
BPUM_1927___m 777 ACCTGTTCACTATTTTATAGAAGATGGTGACGCATTAGTCCCAGTGAATC 826
BSNT_03267 824 GCTGGAAAGCGCATGCCACATTATTGTTTATGAATTGGCTGAATTATTAC 873
|.||||||||.||||||||.|||.||||||||||||||||.||||||||.
BPUM_1927___m 827 GATGGAAAGCCCATGCCACTTTACTGTTTATGAATTGGCTCAATTATTAT 876
BSNT_03267 874 GTTTACCAAGAAACTCCTTATGAATGGGACTAA 906
|||||.||||||||.||.||.|..|||||.|||
BPUM_1927___m 877 GTTTATCAAGAAACACCATACGTTTGGGAATAA 909
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