Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03273 and BPUM_1932

See Amino acid alignment / Visit BSNT_03273 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence dna-align/BSNT_03273___ypeQ.1.24716.seq
#    -bsequence dna-align/BPUM_1932___ypeQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03273___ypeQ
# 2: BPUM_1932___ypeQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity:     132/192 (68.8%)
# Similarity:   132/192 (68.8%)
# Gaps:          18/192 ( 9.4%)
# Score: 426.0
# 
#
#=======================================

BSNT_03273___      1 TTGGATAAGAAAATGATCTTTA-AAGAACTGACAGAATTGCACGATGAAT     49
                     .||||||| ||||..|.|..|| |||||.||||.||..|.||.||....|
BPUM_1932___y      1 GTGGATAA-AAAAACAGCAGTACAAGAATTGACCGATCTTCAAGACACGT     49

BSNT_03273___     50 ATTG--CAAGGACTGTTTTATTAAGAAGCAGTTTCGCAAAGAATTTGGCA     97
                     ||||  ||  ||.|||||.|||||||||||.|||||.|||||||||||||
BPUM_1932___y     50 ATTGTTCA--GATTGTTTGATTAAGAAGCATTTTCGAAAAGAATTTGGCA     97

BSNT_03273___     98 AAACTTATGCGCATTCATTTTGTATCAATAAATGTACGGTTGGTGAAAAG    147
                     |||..|||||.|||||.||||||||..|..||||.||.|||||.||.||.
BPUM_1932___y     98 AAAAATATGCCCATTCCTTTTGTATACAGCAATGCACCGTTGGAGAGAAA    147

BSNT_03273___    148 CTGAAACAATACGGAGATGTCTTAAC------CAATCACTAA    183
                     .|.|||.|||      |||.|..|||      |||..|.|||
BPUM_1932___y    148 ATAAAAGAAT------ATGGCAAAACGCTACTCAAAAAATAA    183


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