Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00522 and BPUM_1948

See Amino acid alignment / Visit BSNT_00522 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence dna-align/BSNT_00522.1.24716.seq
#    -bsequence dna-align/BPUM_1948.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00522-BPUM_1948.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00522-BPUM_1948.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: BPUM_1948
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     713/804 (88.7%)
# Similarity:   713/804 (88.7%)
# Gaps:           6/804 ( 0.7%)
# Score: 3203.0
# 
#
#=======================================

BSNT_00522         1 ATGACCGTGCAGGATATCTGTATTCATTTAGGTATCTCTCGCTCGTCTTA     50
                     |||||.||.|||||.||||||.|.|||||||||||||..||..|.||.||
BPUM_1948          1 ATGACGGTACAGGACATCTGTGTCCATTTAGGTATCTTACGTACTTCGTA     50

BSNT_00522        51 TTATCGTTGGAAGAAGAATCTGA---AGAAAGATCATCCCAAGCGCCATT     97
                     ||||.|.|||||.|||.||.|||   |||   .||||.|.||..|.||..
BPUM_1948         51 TTATAGATGGAAAAAGGATTTGACTCAGA---CTCATTCTAAAAGACAAC     97

BSNT_00522        98 TAGAAAAACAAATCGGCACGTTGTGCCGAGAGCACCAGTATCGATATGGA    147
                     ||||.|||||..|||||||||||||||||.|||||.|.|||||||||||.
BPUM_1948         98 TAGAGAAACAGGTCGGCACGTTGTGCCGAAAGCACAAATATCGATATGGT    147

BSNT_00522       148 TATCGAAAAATCACAGCTATATTAAAAAAGAGAATGTGTATTAACCATAA    197
                     |||||.|||||||||||.|||.||||||.|||||||.|||||||||||||
BPUM_1948        148 TATCGGAAAATCACAGCCATACTAAAAATGAGAATGCGTATTAACCATAA    197

BSNT_00522       198 AACGGTTCAGCGTATTATGCAGAAAAATCAGTGGCAGTGCCGGGTTAAGG    247
                     |||.|||||.|||||.|||||||||||.||||||||.|||||||||||..
BPUM_1948        198 AACTGTTCAACGTATCATGCAGAAAAACCAGTGGCAATGCCGGGTTAAAA    247

BSNT_00522       248 TGAAAAAGCGCAAGAAGAATGGGCAGCCATATGCCGTGGTCGACAATATA    297
                     ||||||||||.|||||||||||||||||.||||||||.|.||..||||||
BPUM_1948        248 TGAAAAAGCGTAAGAAGAATGGGCAGCCTTATGCCGTAGCCGGTAATATA    297

BSNT_00522       298 TTAGATAGGAACTTTCAGTCTGATCATCCTCTTGAAAAACTAGTAACAGA    347
                     .|.|||.||||.|||||||||||||..||||||||||||.|||||||.||
BPUM_1948        298 CTGGATCGGAATTTTCAGTCTGATCGCCCTCTTGAAAAATTAGTAACGGA    347

BSNT_00522       348 CATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTTCCAGTATAT    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1948        348 CATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTTCCAGTATAT    397

BSNT_00522       398 TGGATGTATATAATGGAGAAGTGATTGCTTTTACGATTGGAGATAAGCAG    447
                     |||||.||||||||||||||||||||||||||||||||||.|||||||||
BPUM_1948        398 TGGATTTATATAATGGAGAAGTGATTGCTTTTACGATTGGTGATAAGCAG    447

BSNT_00522       448 GACACAGACCTTGTCTTACACACACTTGATCAACTGCCAACACTGCCTGA    497
                     |||||||||.||.|||||.||||||||.||||.||.|||.||||||||||
BPUM_1948        448 GACACAGACTTTATCTTAAACACACTTAATCAGCTCCCAGCACTGCCTGA    497

BSNT_00522       498 GAACTGCGTGTTACATAGTGACCAAGGATCTGTGTATACATCTTACGAGT    547
                     |||.||||||||||||||.||.|||||.||||||||||||||||||||||
BPUM_1948        498 GAATTGCGTGTTACATAGCGATCAAGGTTCTGTGTATACATCTTACGAGT    547

BSNT_00522       548 ATCAGAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATGTCCCGCAAA    597
                     ||||.|||||||||.|.|.|||||||||||||||||||||||||||.|||
BPUM_1948        548 ATCAAAAAGCTGTTCATATAAAAGGCATTACCATGAGCATGTCCCGTAAA    597

BSNT_00522       598 GGGACACCCGCTGATAATGCCTCCATCGAATCGTTTCATTCCTCACTAAA    647
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BPUM_1948        598 GGGACGCCCGCTGATAATGCCTCCATCGAATCGTTTCATTCCTCACTAAA    647

BSNT_00522       648 GTCTGAAACGTTCTATCTTAACAGCATTGATCGAACCACGACCGCCATCG    697
                     ||||||||||||||||||||||||.||||||||.||.||||||.||||||
BPUM_1948        648 GTCTGAAACGTTCTATCTTAACAGGATTGATCGTACTACGACCACCATCG    697

BSNT_00522       698 TAGAACGCACTGTCATAGAATACATTCATTATTATAACAATATTCGTATT    747
                     |||||||||||||||.||||||||||.|||||||||||||.|||||||||
BPUM_1948        698 TAGAACGCACTGTCAAAGAATACATTTATTATTATAACAACATTCGTATT    747

BSNT_00522       748 CAAACGAAACTAAACAACCAATCACCGATAAATTATCGGCAATTGGCTGT    797
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BPUM_1948        748 CAAACGAAACTAAACAACCAATCACCGATAAACTATCGGCAATTGGCTGT    797

BSNT_00522       798 TTAA    801
                     .|||
BPUM_1948        798 ATAA    801


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