Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03314 and BPUM_1958
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_03314___yppG.1.24716.seq
# -bsequence dna-align/BPUM_1958___yppG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03314___yppG-BPUM_1958___yppG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03314___yppG-BPUM_1958___yppG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03314___yppG
# 2: BPUM_1958___yppG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 266/482 (55.2%)
# Similarity: 266/482 (55.2%)
# Gaps: 133/482 (27.6%)
# Score: 785.5
#
#
#=======================================
BSNT_03314___ 1 ----------------------------ATGAACGGGAGCTCTCGAAGCT 22
||||| |..||.|.
BPUM_1958___y 1 ATGATCCCTTATTCAAACCAGCAGCCTTATGAA---------TTCAATCC 41
BSNT_03314___ 23 ATCC--TCGGCAAATGGGCTATT-ATTATCC------------TCAGCAT 57
||.| || ||.||.||.|| ..||||| .||||.|
BPUM_1958___y 42 ATTCAATC----AAGGGCCTTTTCCGTATCCAGAAATGCAGCAACAGCCT 87
BSNT_03314___ 58 ATGCA------AGGATATT--AT-------CAGCAGGCTGC----ACCCG 88
..||| ||.||||| || ||.||.|.||| |.||.
BPUM_1958___y 88 CCGCAGCCTCCAGAATATTTCATGCCGCCGCATCAAGGTGCCATGAGCCA 137
BSNT_03314___ 89 GTTATTTAGAGCAACAACTGC-----CTCAGCAGCATTATGGACAGCAGG 133
| |||.||.|||| .|||||.||.|||||||.|.||.|
BPUM_1958___y 138 G---------GCATCACCTGCTGTCTATCAGCCGCCTTATGGATACCAAG 178
BSNT_03314___ 134 ATTA---------TTATCAGCC---------------TTATGCTCC-GAT 158
|..| ||.|||||| |.| ||.|| |||
BPUM_1958___y 179 AAAATGTGCCGCCTTTTCAGCCGCCCGAAGCGATCAATCA-GCCCCAGAT 227
BSNT_03314___ 159 CCAGCC---------TATGCCTATGCAGCCGCCTGTATTTTCTAACCCTT 199
.||||| .|||||.|||||||.||||.| .|||||||
BPUM_1958___y 228 GCAGCCATCAGGCATGATGCCCATGCAGCAGCCTAT------GAACCCTT 271
BSNT_03314___ 200 ATCCTATCCCAAGGCCTAATCAACAGCAGCCTTCACAATTTCAAAGCATT 249
|||||.|.|||||.||..|..|||||||..|.||.||||||.||||..|.
BPUM_1958___y 272 ATCCTTTGCCAAGACCGCAAAAACAGCAATCATCTCAATTTAAAAGTGTA 321
BSNT_03314___ 250 ATGTCGCAGTTCAAAAAAGCCAATGGGCAATTTGATTTTAATAAAATGAT 299
.|.|||||.|||||||||.|.|||||.|||||.||||||||.||||||.|
BPUM_1958___y 322 CTATCGCAATTCAAAAAAACGAATGGACAATTCGATTTTAACAAAATGTT 371
BSNT_03314___ 300 GGATACGACAGGTCAAGTAATGAGTGCAATGAATCAGGTCGGATCTTTAA 349
.|||||..|.||.|||.|.||||||.||||||||||.||.||.||.|||.
BPUM_1958___y 372 TGATACAGCTGGGCAAATGATGAGTACAATGAATCAAGTAGGCTCATTAG 421
BSNT_03314___ 350 TAAAGGGATTTACCAGCTTTTTTAAATGA--- 378
..||.||||||||.|||.||||||||..|
BPUM_1958___y 422 CGAAAGGATTTACGAGCATTTTTAAAGCATAG 453
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