Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03332 and BPUM_1968
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_03332___asnC.1.24716.seq
# -bsequence dna-align/BPUM_1968___asnC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03332___asnC-BPUM_1968___asnC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03332___asnC-BPUM_1968___asnC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03332___asnC
# 2: BPUM_1968___asnC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1369
# Identity: 1016/1369 (74.2%)
# Similarity: 1016/1369 (74.2%)
# Gaps: 83/1369 ( 6.1%)
# Score: 3885.5
#
#
#=======================================
BSNT_03332___ 0 -------------------------------------------------- 0
BPUM_1968___a 1 ATGTATGAAAAAAGAATCACACCTATCGAAAAGGTGAGCTTCTTTCTGGC 50
BSNT_03332___ 1 -------------ATGTTGAAAACAACAATCAACCAAGTGTACAAGCACG 37
||||||||||||||.||.||.|||||||.|||.||.|
BPUM_1968___a 51 TTTGGAGGGAATTATGTTGAAAACAACGATTAATCAAGTGTTCAAACATG 100
BSNT_03332___ 38 TAGGTGAGGAAGTAACGATCGGAGCTTGGGTCGCTAATAAGCGTTCAAGC 87
|.|.|||.||.|||||.|||||.||.|||.|.||.|||||.|||||||||
BPUM_1968___a 101 TCGATGAAGATGTAACCATCGGCGCATGGATTGCCAATAAACGTTCAAGC 150
BSNT_03332___ 88 GGGAAAATTGCGTTTTTACAGCTTCGGGACGGTACCGGTTTTATTCAGGG 137
||.||||||||.||.||.|||.|.||.|||||.||.||.||||||||.||
BPUM_1968___a 151 GGTAAAATTGCATTCTTGCAGTTGCGTGACGGGACAGGCTTTATTCAAGG 200
BSNT_03332___ 138 TGTCGTAGTAAAAGCGGAAGTGGAAGA--AAGCATTTTCCAAAC-AGCTA 184
.||||||||||||||.|||||.||||| |||..||| ||.| .||.|
BPUM_1968___a 201 AGTCGTAGTAAAAGCAGAAGTAGAAGAGGAAGTCTTT---AAGCTTGCAA 247
BSNT_03332___ 185 AATCAGTGACGCAGGAAACGTCGCTCTATATAAAAGGGATTGTCAAAGAG 234
|||||||.||.||.|||||.||..|||||.|.|.|||....||.|.|.|.
BPUM_1968___a 248 AATCAGTCACTCAAGAAACATCTGTCTATGTGACAGGACAAGTAACAAAA 297
BSNT_03332___ 235 GACGAGCGTTCTCCGCTTGGATATGAACTTGC-TGTGACAGATATTGAAG 283
|||||||||||.||.|||||.|.|||| |||| .||||.|...|||||||
BPUM_1968___a 298 GACGAGCGTTCACCTCTTGGTTTTGAA-TTGCAAGTGAAATCCATTGAAG 346
BSNT_03332___ 284 TCATTCACGAAGCGACCGATTATCCAATTACACCAAAAGAACACGGAACG 333
|.|||||.|||||.||.||.||.||.||||||||||||||.||.|||||.
BPUM_1968___a 347 TGATTCATGAAGCAACTGACTACCCGATTACACCAAAAGAGCATGGAACA 396
BSNT_03332___ 334 GAATTTTTGATGGATCACAGACATTTATGGCTGCGTTC---AAAGCGCCA 380
|||||.||.|||||||||.|.|||||||||||.||||| |||| ||
BPUM_1968___a 397 GAATTCTTAATGGATCACCGTCATTTATGGCTTCGTTCTAAAAAG---CA 443
BSNT_03332___ 381 GCATGCGATCATGAAAATCCGTAATGAAATCATTCGCGCGACTTACGAAT 430
||||||.||.||||||||.|||||.|||||||||||.||.||.||.||||
BPUM_1968___a 444 GCATGCCATTATGAAAATTCGTAACGAAATCATTCGTGCTACATATGAAT 493
BSNT_03332___ 431 TCTTTAATAACGAAGGCTTCGTAAAAGTGGATCCGCCGATTTTGACTGGA 480
||||..||.|.|||||||||||.|||||.||||||||.|||||.||||||
BPUM_1968___a 494 TCTTCCATCAAGAAGGCTTCGTGAAAGTAGATCCGCCAATTTTAACTGGA 543
BSNT_03332___ 481 AGCGCACCTGAAGGAACAACAGAACTCTTTGCGACAAAGTACTTTGATGA 530
||.||||||||.||.|||||.||.||.||||||||.||.||.||||||||
BPUM_1968___a 544 AGTGCACCTGAGGGCACAACGGAGCTGTTTGCGACGAAATATTTTGATGA 593
BSNT_03332___ 531 AGATGCGTATCTGTCTCAAAGCGGCCAGCTCTACATGGAAGCTGCGGCAA 580
|||.||.||.||.||||||||.||.|||||.||||||||||||||.||.|
BPUM_1968___a 594 AGACGCATACCTTTCTCAAAGTGGACAGCTTTACATGGAAGCTGCTGCTA 643
BSNT_03332___ 581 TGGCTTTAGGAAAAGTATTCTCTTTCGGACCGACATTCAGAGCGGAAAAG 630
||||..|.||.||||||||.||||||||.||.|||||.|||||.|||||.
BPUM_1968___a 644 TGGCACTTGGGAAAGTATTTTCTTTCGGTCCAACATTTAGAGCTGAAAAA 693
BSNT_03332___ 631 TCTAAAACAAAGCGTCACTTAATCGAATTCTGGATGATCGAACCGGAAAT 680
|||||||||||.||.||.|||||.||.||.|||||||||||.||.||.||
BPUM_1968___a 694 TCTAAAACAAAACGCCATTTAATTGAGTTTTGGATGATCGAGCCTGAGAT 743
BSNT_03332___ 681 GGCGTTTGTAGAATTTGAAGAAAACCTTCAAGTA-CAGGAAAATTACGTT 729
|||.|||||.||||||.|.||||||||| .|||| ||.|||||.||.||.
BPUM_1968___a 744 GGCTTTTGTCGAATTTAATGAAAACCTT-GAGTATCAAGAAAACTATGTA 792
BSNT_03332___ 730 TCTTTCA--TCGTACAATCAGTTCTTAAGAATTGTAAAATTGAATTAAAC 777
.| ||| |.||.|||...||.|||.|.||.||||||.|.|||.|..|.
BPUM_1968___a 793 AC--TCATGTGGTTCAAAGTGTACTTGAAAACTGTAAAGTGGAACTGCAT 840
BSNT_03332___ 778 ACATTGGGAAGAGACACGTCAAAACTTGAGCAAATCAAAGCTCCGTTCCC 827
|||.|.||..|.||.||..|||||||.||..|.||||||||.||.|||||
BPUM_1968___a 841 ACACTTGGCCGTGATACAGCAAAACTAGAAAATATCAAAGCACCATTCCC 890
BSNT_03332___ 828 AAGAATCACGTATGATGAAGCGATTGAATTTCTGAAAGAAAAAGGCTTTG 877
..|.|||||.||.||||||||.|||.||||..||.||||||||||.||||
BPUM_1968___a 891 GCGTATCACTTACGATGAAGCCATTAAATTCTTGCAAGAAAAAGGATTTG 940
BSNT_03332___ 878 ACGATATCGAGTGGGGAGATGATTTCGGAGCGCCTCATGAAACAGCGATT 927
|||||||.||.|||||||||||.|||||.||||||||.|||||||||||.
BPUM_1968___a 941 ACGATATTGAATGGGGAGATGACTTCGGCGCGCCTCACGAAACAGCGATC 990
BSNT_03332___ 928 GCTGAACACTATGACAAACCGGTATTCATCACTCGCTATCCGACGTCCTT 977
||||||..|||.||.|||||.||.||.|||||||.|||.||.||.||.||
BPUM_1968___a 991 GCTGAAAGCTACGATAAACCAGTGTTTATCACTCACTACCCAACATCATT 1040
BSNT_03332___ 978 AAAACCGTTCTATATGCAGCCGGCTTCTGACCGTGAGGACGTTGTGCTTT 1027
||||||.||.||.||||||||.||..|.||.|||||.||.||.||.||||
BPUM_1968___a 1041 AAAACCATTTTACATGCAGCCTGCACCAGATCGTGATGATGTCGTTCTTT 1090
BSNT_03332___ 1028 GCGCTGACTTGATTGCGCCGGAAGGCTATGGAGAAATCATCGGCGGGTCT 1077
|.||.|||||||||||.||.||||||||||||||.|||||.|||||.|||
BPUM_1968___a 1091 GTGCAGACTTGATTGCTCCAGAAGGCTATGGAGAGATCATTGGCGGTTCT 1140
BSNT_03332___ 1078 GAACGGATTCACGATATGGAACTTTTGGAATCGCGTCTTAAAGAACATGG 1127
||.||..||||.|||.|.||.|||.|.|||.|..|..|.|||||||||||
BPUM_1968___a 1141 GAGCGTGTTCATGATCTAGAGCTTCTAGAAGCAAGATTGAAAGAACATGG 1190
BSNT_03332___ 1128 ACTGGATTCTGACGCATATAAATGGTATGCTGAACTTAGAAAATATGGAT 1177
|||.|||...||..|.||.||||||||..|.|||.|.|||.|||||||.|
BPUM_1968___a 1191 ACTAGATCAAGAAACTTACAAATGGTACACAGAATTAAGACAATATGGTT 1240
BSNT_03332___ 1178 CAGTTCCTCATTCCGGCTTCGGCCTTGGATTAGAGCGGACAGTAGCTTGG 1227
|.||.||.|||||.||.|||||.||||||.|.||.||.|||||.||||||
BPUM_1968___a 1241 CTGTCCCGCATTCAGGTTTCGGTCTTGGACTTGAACGTACAGTTGCTTGG 1290
BSNT_03332___ 1228 ATCAGCGGAGCGCCTCACGTTCGTGAAACGATTCCGTTCCCAAGACTGTT 1277
||.||.||||||||.||.||.||||||||.|||||.|||||||||.|.||
BPUM_1968___a 1291 ATTAGTGGAGCGCCGCATGTGCGTGAAACCATTCCTTTCCCAAGATTATT 1340
BSNT_03332___ 1278 AAACCGTCTGTATCCGTAA 1296
|||||||.|.|||||.|||
BPUM_1968___a 1341 AAACCGTTTATATCCTTAA 1359
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