Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03404 and BPUM_2021
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03404___rpsA.1.24716.seq
# -bsequence dna-align/BPUM_2021___rpsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03404___rpsA-BPUM_2021___rpsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03404___rpsA-BPUM_2021___rpsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03404___rpsA
# 2: BPUM_2021___rpsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1165
# Identity: 936/1165 (80.3%)
# Similarity: 936/1165 (80.3%)
# Gaps: 29/1165 ( 2.5%)
# Score: 3761.0
#
#
#=======================================
BSNT_03404___ 1 ATGACAGAGGAAATGAATCAAATTGATGTTCAAGTGCCAGAGGTTGGAGA 50
|||||||||||||||||||||||.||||||||.||.||||||||||||||
BPUM_2021___r 1 ATGACAGAGGAAATGAATCAAATCGATGTTCAGGTACCAGAGGTTGGAGA 50
BSNT_03404___ 51 TGTAGTTAAAGGGATTGTGACAAAGGTAGAAGACAAACATGTAGATGTAG 100
||||||.|||||||||||..|.||.||.||.|||||.|||||..||||||
BPUM_2021___r 51 TGTAGTGAAAGGGATTGTTTCTAAAGTTGAGGACAAGCATGTCAATGTAG 100
BSNT_03404___ 101 AAATTATCAATGTCAAACAATCCGGTATTATTCCAATCAGTGAATTATCA 150
|.||..|||||||.|||||..|.||.||.||.||||||||||||||||||
BPUM_2021___r 101 ATATCGTCAATGTGAAACAGCCTGGGATCATCCCAATCAGTGAATTATCA 150
BSNT_03404___ 151 AGTCTTCATGTAGAGAAAGCATCGGATGTTGTTAAAGTAGACGACGAGCT 200
||||||||.||.||.||||||||.|||||.||.||||..|.||||||..|
BPUM_2021___r 151 AGTCTTCACGTTGAAAAAGCATCAGATGTCGTGAAAGATGGCGACGAATT 200
BSNT_03404___ 201 TGACCTGAAAGTAACAAAAGTGGAAGACGATGCTTTGATTTTATCTAAAC 250
.||.||.||||||||.|||||.|||||||||||||||||||||||.||||
BPUM_2021___r 201 AGAGCTTAAAGTAACCAAAGTCGAAGACGATGCTTTGATTTTATCGAAAC 250
BSNT_03404___ 251 GTGCTGTTGATGCAGACCGCGCTTGGGAAGACCTTGAGAAAAAATTTGAA 300
||||||||||||||||||||||||||||||||||.||||.|||.||||||
BPUM_2021___r 251 GTGCTGTTGATGCAGACCGCGCTTGGGAAGACCTAGAGAGAAAGTTTGAA 300
BSNT_03404___ 301 ACAAAAGAAGTGTTTGAAGCTGAAGTGAAAGATGTCGTGAAAGGCGGCCT 350
|||||||||||.||||||||||||||.|||||.||.||.|||||.||.||
BPUM_2021___r 301 ACAAAAGAAGTATTTGAAGCTGAAGTAAAAGACGTTGTAAAAGGTGGTCT 350
BSNT_03404___ 351 TGTCGTTGATATCGGCGTTCGCGGTTTTATTCCGGCATCGCTTGTTGAAG 400
||||||.|||||.||.||.||.||.||||||||.|||||.|||||.||||
BPUM_2021___r 351 TGTCGTAGATATTGGTGTGCGTGGATTTATTCCTGCATCTCTTGTAGAAG 400
BSNT_03404___ 401 CACATTTCGTTGAAGACTTCACTGACTATAAAGGAAAAACACTGTCACTG 450
|.||.|..|||||.|||||..|.|||||.|||||.||||||||.|||||.
BPUM_2021___r 401 CGCACTATGTTGAGGACTTTTCAGACTACAAAGGTAAAACACTCTCACTT 450
BSNT_03404___ 451 CTCGTTGTAGAGCTTGACCGTGATAAAAACCGCGTGATCCTTTCACACCG 500
.||||.||.||.||||||||.||.|||||.||.||.||.||.||.|||||
BPUM_2021___r 451 GTCGTGGTTGAACTTGACCGCGAAAAAAATCGTGTAATTCTCTCGCACCG 500
BSNT_03404___ 501 TGCTGTTGTTGAAAGT-GAACAAGCG-AAT-----AAAAAACAAGAACTT 543
|||.|| ||| ||.||||.| ||| |||||.|||| ||||
BPUM_2021___r 501 TGCAGT-------AGTGGAGCAAGAGCAATTAGACAAAAAGCAAG-ACTT 542
BSNT_03404___ 544 CTT-CAGTCTCTTGAAGTTGGGAGTGTACTTGATGGCAAAGTACAGCGCC 592
||| ||....|||||.||.||.|||||..||||.||.|||||.||.||||
BPUM_2021___r 543 CTTGCAAAAACTTGAGGTAGGCAGTGTTATTGACGGTAAAGTGCAACGCC 592
BSNT_03404___ 593 TGACTGATTTTGGCGCGTTTGTTGATATCGGCGGCATCGACGGACTTGTA 642
|.|||||||||||.||.|||||.||.||.||||||||.||.|||.|.||.
BPUM_2021___r 593 TTACTGATTTTGGTGCATTTGTAGACATTGGCGGCATTGATGGATTGGTT 642
BSNT_03404___ 643 CACATTTCACAGCTTTCCCACTCTCATGTAGAGAAACCGTCTGACGTTGT 692
||||||||.||.||.|||||..|.|||||.||.||.||.||||||||.||
BPUM_2021___r 643 CACATTTCTCAACTATCCCATGCGCATGTTGAAAAGCCATCTGACGTAGT 692
BSNT_03404___ 693 TGAAGAGGGACAAGAAGTAAAAGTGAAAGTGTTATCGGTTGACCGTGACA 742
.|||||.||.||.|||||..|.||.|||||..||.|.|||||.|||||.|
BPUM_2021___r 693 GGAAGAAGGCCAGGAAGTCCAGGTCAAAGTACTAGCTGTTGATCGTGATA 742
BSNT_03404___ 743 ATGAACGTATTTCTTTATCAATCAAAGATACACTGCCTGGACCTTGGAGC 792
|.||.|||||.||..||||.||.|||||.|||.|.||.||||||||||||
BPUM_2021___r 743 ACGAGCGTATCTCACTATCTATTAAAGAAACATTACCAGGACCTTGGAGC 792
BSNT_03404___ 793 CAAATCGGCGAAAAAGTGAAGCCTGGCGATGTGCTTGAAGGAACTGTACA 842
||.||.||||||||.||.||.|..||.||||||||||||||||||||.||
BPUM_2021___r 793 CAGATTGGCGAAAAGGTAAAACAAGGTGATGTGCTTGAAGGAACTGTCCA 842
BSNT_03404___ 843 GCGTCTTGTAAGCTTCGGTGCCTTTGTTGAAATCCTTCCAGGTGTTGAAG 892
.||||||||||||||.|||||.|||||||||||.||.|||||.||.||||
BPUM_2021___r 843 ACGTCTTGTAAGCTTTGGTGCATTTGTTGAAATTCTGCCAGGCGTCGAAG 892
BSNT_03404___ 893 GTCTCGTTCATATTTCTCAAATTTCCAATAAACACATCGGCACGCCGCAT 942
|.||.||.||||||||.|||||.||..|||||||.|||||.||.||||||
BPUM_2021___r 893 GACTTGTGCATATTTCCCAAATCTCTCATAAACATATCGGTACACCGCAT 942
BSNT_03404___ 943 GAAGTCCTTGAAGAAGGACAGACTGTAAAAGTGAAGGTTCTTGATGTGAA 992
|||||||||||||||||.||.|||||.|||||.||.||.|||||||||||
BPUM_2021___r 943 GAAGTCCTTGAAGAAGGGCAAACTGTGAAAGTCAAAGTGCTTGATGTGAA 992
BSNT_03404___ 993 TGAAAATGAGGAGCGCATTTCATTAAGCATGCGTGAACTTGAAGAAACGC 1042
||||.||||.||||||||||||.|||||||.|||||..|.|||||||..|
BPUM_2021___r 993 TGAAGATGAAGAGCGCATTTCACTAAGCATTCGTGATTTAGAAGAAAATC 1042
BSNT_03404___ 1043 CT--AAAGCTGATCAGGAAG---ATTACCGTCAATATCAAGCGAAGGAAG 1087
|| |||.|..||| |||| ||||.|||||||||||.|||||.||||
BPUM_2021___r 1043 CTGAAAAACAAATC--GAAGAGAATTATCGTCAATATCAGGCGAAAGAAG 1090
BSNT_03404___ 1088 AA---ACAAGCACTGGCTTCCAGCTTGGAGATCTGATCGGAGATAAGCTG 1134
|| |||||| ||.|||||||||||.||.||||||||.||||||||.
BPUM_2021___r 1091 AAAACACAAGC---GGATTCCAGCTTGGTGACCTGATCGGCGATAAGCTC 1137
BSNT_03404___ 1135 AATAAACTAAAATAA 1149
||||||.||||||||
BPUM_2021___r 1138 AATAAATTAAAATAA 1152
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