Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03444 and BPUM_2047
See
Amino acid alignment /
Visit
BSNT_03444 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_03444___resB.1.24716.seq
# -bsequence dna-align/BPUM_2047___resB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03444___resB-BPUM_2047___resB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03444___resB-BPUM_2047___resB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03444___resB
# 2: BPUM_2047___resB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1756
# Identity: 1175/1756 (66.9%)
# Similarity: 1175/1756 (66.9%)
# Gaps: 203/1756 (11.6%)
# Score: 3803.5
#
#
#=======================================
BSNT_03444___ 1 ATGAAGCAAGTCAAATGTGAATGCGGACATATAAACCCGGTCGGAACCGT 50
|||||..|.||.|||||.||.||.||||||||.||.||..||||.||.||
BPUM_2047___r 1 ATGAAAGAGGTAAAATGCGAGTGTGGACATATTAATCCAATCGGTACTGT 50
BSNT_03444___ 51 TTTATGCGAATCGTGCGG-----------------AAGAG-----CTCTT 78
||||||.|||||.||||| ||||| |||||
BPUM_2047___r 51 TTTATGTGAATCCTGCGGGAATCCTATTGCGGCTAAAGAGAAAAACTCTT 100
BSNT_03444___ 79 CAGGAAACTCAACCTCCGCTCGCTGATATGAGATATGACGGAAGCGCAAG 128
|| ||.|| ||| ||||||||||||||||||.||.||.||
BPUM_2047___r 101 CA--------AAGCT--GCT---TGATATGAGATATGACGGCAGTGCGAG 137
BSNT_03444___ 129 ACGTTCGCAAACCTATAACAAAACGATCATCGATAAAATTTGGAATTTCT 178
|||.||||||||.||.|||||||||||..|.||||||.|.|||||.||.|
BPUM_2047___r 138 ACGCTCGCAAACATACAACAAAACGATTGTTGATAAAGTATGGAACTTTT 187
BSNT_03444___ 179 TTTCCTCGGTTAAGGTGGGAATATGGCTTATCGTCATAAC---CCTTGCC 225
||||.||.|||||||||||..|.|||||.||.|||||.|| .|||||.
BPUM_2047___r 188 TTTCTTCCGTTAAGGTGGGTGTGTGGCTGATTGTCATTACACTACTTGCT 237
BSNT_03444___ 226 GCATCAGCGTTCGGCACCATTTTTCCCCAGGAAGC-CTATCTGCCTCCGG 274
.|.||| ||.||.||.||||||||.|||| ||| .|.|.|.||.||.|
BPUM_2047___r 238 TCCTCA---TTAGGAACGATTTTTCCGCAGG-AGCGATTTATTCCACCAG 283
BSNT_03444___ 275 GCGCACAGGCTGATACTTATTACAAGGAGCAGTACGGCACGTTCGGCCAG 324
|.|||...|||...||.|||||..|.|||||.||.||..||||.||..||
BPUM_2047___r 284 GTGCATCTGCTTCCACCTATTATGAAGAGCAATATGGATCGTTTGGTAAG 333
BSNT_03444___ 325 CTTTATTATTTGCTCGGGTTTCATCATTTATATGGTTCTTGGTGGTATTT 374
||.||.||....||.||.||.|||.||.|.|||..|||||||||||.|||
BPUM_2047___r 334 CTGTACTACACACTTGGATTCCATGATCTTTATAATTCTTGGTGGTTTTT 383
BSNT_03444___ 375 -GCTGCTCA-TTGCCTCGATCGGCATTTCACTCGTGATTTGCAGCCTTGA 422
||| |.| ||||.||.|||||.||.||.||.||.||||||||.||.||
BPUM_2047___r 384 AGCT--TTAGTTGCATCCATCGGAATCTCCCTTGTCATTTGCAGTCTCGA 431
BSNT_03444___ 423 TCGGGTCATTCCGTTGTACAGAGCGTTAAAAAACCAAGGCG----TC--- 465
.|||||.||.||..|.||..||||..|.|||||.||||| | ||
BPUM_2047___r 432 CCGGGTTATCCCTCTTTATCGAGCACTTAAAAATCAAGG-GATTATCAAA 480
BSNT_03444___ 466 --AGAAGGAGCCCAGCTTTTTTAAGAAGGCAGCGCTTGTTCAGTGAAACA 513
|||||| .|||.|.|||||.|||||..||||||||||.|||
BPUM_2047___r 481 AAAGAAGG--------CTTTATGAGAAGACAGCGTCTGTTCAGTGAGACA 522
BSNT_03444___ 514 --------GTTA-CTG----TAC---TGAACGGGGAATCGAAAGAAAAGA 547
|||| .|| ||| |||| ||.||| ||||||
BPUM_2047___r 523 GACAAAATGTTAGATGAGCATACATATGAA---GGCATC--AAGAAA--- 564
BSNT_03444___ 548 TAGTTGCTCTATTAAAGAAAAAACATTATAGAATCAGAGAA-AAAGAGGG 596
|| |.|.|||.||||.|.|||..|..|..||||| |||..||.
BPUM_2047___r 565 -----GC---AATGAAGCAAAAGCGTTACCGGGTACGAGAAGAAAACGGA 606
BSNT_03444___ 597 CAGCATTCTTGCTGAAAAAGGACGCTTTTCCCGCTGGGGCCCGTATGTCA 646
|| .|||.|.||.||||||||.|||||.||.|||||||||||.||.||||
BPUM_2047___r 607 CA-TATTTTAGCGGAAAAAGGCCGCTTCTCACGCTGGGGCCCTTACGTCA 655
BSNT_03444___ 647 ACCATATTGGATTGATCATCTTTTTGATTGGTGCGATGCTGAGATTTGTG 696
|.||.||||||||.|||||||||.|.|||||..|.|||||..|.|||||.
BPUM_2047___r 656 ATCACATTGGATTAATCATCTTTCTCATTGGATCAATGCTCCGGTTTGTC 705
BSNT_03444___ 697 CCTGGCATGTACGTCGATGAGACGCTTTGGGTCAGAGAAGGCGAAACCGC 746
||.||||||||.||.|||||.|||||.|||||.|||||.||.|||||.||
BPUM_2047___r 706 CCAGGCATGTATGTGGATGAAACGCTGTGGGTGAGAGAGGGTGAAACTGC 755
BSNT_03444___ 747 CGCAATTCCGGGTACAGACGGAAAATATTATTTGAAAAACAA-------T 789
|.|||||||.||.|||||.||..||||||.|||||||||.|| |
BPUM_2047___r 756 CCCAATTCCAGGCACAGATGGTCAATATTTTTTGAAAAATAATGCGTTTT 805
BSNT_03444___ 790 CAATTCAGCGTAGAGACCTAT--AACAGCAAAACAGAAAAAAAGGTATTT 837
|||||.|.|| |||| |||.|.||| .||||||.|.||.|||
BPUM_2047___r 806 CAATTGACCG-------CTATGAAACTGGAAA--TGAAAAAGAAGTGTTT 846
BSNT_03444___ 838 GCAG-ATGCCATTGACAGAGTCGGGGACGGTAGAGTGGCAAAGAACTT-T 885
| || ||||.|||||.||||..||.||||||..|||.|..|| ||.|| |
BPUM_2047___r 847 G-AGAATGCGATTGAAAGAGCTGGCGACGGTCAAGTAGTGAA-AAGTTAT 894
BSNT_03444___ 886 CAAACCGATGCCGTAC--TCTACAAGAGAGAAGGAAAAATTGTTTATGGC 933
.||||||||||| || |.|||||..|.|||||..||.||||.|.|||.
BPUM_2047___r 895 AAAACCGATGCC--ACTTTATACAAACGTGAAGGGGAAGTTGTGTTTGGT 942
BSNT_03444___ 934 GAGAAGCCGAAGCTGAAAAAAGTAACAGAAGAAGACATCCGTGTCAATCA 983
||.|||||.||||||||..|.|||.|||||.|..|.|||...||.||..|
BPUM_2047___r 943 GAAAAGCCCAAGCTGAAGCAGGTATCAGAACACAATATCAAAGTGAACGA 992
BSNT_03444___ 984 GCCGCTGCGTTTTGATTCTTTTTCCGTTTACCAGGTGGATTACAAAGAGA 1033
.|||||....||||||..|||.||..|.||.||.|||||||..|||.|.|
BPUM_2047___r 993 ACCGCTCAAGTTTGATCATTTCTCATTATATCAAGTGGATTTTAAACAAA 1042
BSNT_03444___ 1034 ATCAGCTTGACCAAATGGTGTTCCAGCTGATTGATAAAAAAACAAAAAAA 1083
||.|.||.||.||||||||.||.|||||||||..||||.|.|||.|||||
BPUM_2047___r 1043 ATGAACTCGATCAAATGGTCTTTCAGCTGATTCGTAAAGATACAGAAAAA 1092
BSNT_03444___ 1084 TCCTTTGGGAGC-CTGAAGATCAACCTTCTGGATCCAGATTCGGTCTATG 1132
| ||||.|||.| .|||||||.||.||.|||||.||..|.||.|..||||
BPUM_2047___r 1093 T-CTTTCGGAACAGTGAAGATTAATCTGCTGGAGCCTAAGTCAGAATATG 1141
BSNT_03444___ 1133 ATCTTGGCAACGGTTACAAGGTGGAAATCGCCAGCTACCTGCCTGACTTC 1182
|||||||.|.|||||||||.||..||.|....|||||.||.|||||.||.
BPUM_2047___r 1142 ATCTTGGTAGCGGTTACAAAGTTAAAGTGATGAGCTATCTCCCTGATTTT 1191
BSNT_03444___ 1183 TATTTTAATCAGGACGGAGAGCCGAGCACAAAAACAAAGATCCCTAACAA 1232
||||||.|..|.||.|||..||||||.||.||.||||.||..||.||.||
BPUM_2047___r 1192 TATTTTGACGATGATGGAACGCCGAGTACGAAGACAAGGAATCCGAATAA 1241
BSNT_03444___ 1233 TCCGGCTTTTGTCTTTAATATTATAACGCCGGACAAACCGAAAGGCGAAA 1282
|||.|||||.||.|||.|.||..|..|.||.||.||.||.|||||.||||
BPUM_2047___r 1242 TCCTGCTTTCGTGTTTGAAATGGTTTCTCCTGAAAAGCCTAAAGGTGAAA 1291
BSNT_03444___ 1283 AGAGCTTTGTCGCCATCCAAGAAACCATCGAAGGATCAGACAATAA--TA 1330
|.||||||||.||.||.|||||.||..|.||.||.||.||.||||| ||
BPUM_2047___r 1292 AAAGCTTTGTGGCGATTCAAGAGACAGTAGAGGGCTCTGATAATAACCTA 1341
BSNT_03444___ 1331 AATACAAGCTGAAATTTGACCATGTCGAAACGAAAAACATTACTGGACTT 1380
.|||.|| ||||.|||||.|..||.||||||||||||.|.||.|||.|.
BPUM_2047___r 1342 TATAAAA--TGAAGTTTGATCGAGTGGAAACGAAAAACGTCACGGGATTG 1389
BSNT_03444___ 1381 ACAGTCAGAAAGGATCTGACACTCTGGGTGCTTGCTGTCGGCGGAGCCAT 1430
|||||.|||||.|||.|.||.||..|||||||....||.||||||..|||
BPUM_2047___r 1390 ACAGTGAGAAAAGATTTAACTCTTGGGGTGCTCATCGTAGGCGGAATCAT 1439
BSNT_03444___ 1431 TTTTATGATCGGTGTTATTCAAGGTATGTACTGGCAGCATCGAAGAATTT 1480
.||.|||||.|||||..|.||.||.|||||.|||||||||.|||||||||
BPUM_2047___r 1440 CTTCATGATTGGTGTCGTGCAGGGGATGTATTGGCAGCATAGAAGAATTT 1489
BSNT_03444___ 1481 GGCTGCACT-CACAGGACGGTGCAGTTATGGTAGCGGGGCATACCAATAA 1529
||||| .|| ||..|||.||...|||..|.||.||.||.|||||.||.||
BPUM_2047___r 1490 GGCTG-TCTGCAAGGGATGGAAAAGTATTCGTGGCAGGACATACAAACAA 1538
BSNT_03444___ 1530 AAACTGGTTTGGCCTGAAGAAGGATTTAGCAT-TTATATTGGC-TGATTC 1577
|||||||||||||.|.||| | |.||.||||| ||| ||
BPUM_2047___r 1539 AAACTGGTTTGGCTTAAAG------------TCTGATCTTGGCGTGA-TC 1575
BSNT_03444___ 1578 CGGACTGACTG-----------AACCGGTGGACCAAAAAGAA----TTAA 1612
|..|.||||.| |.||.||.||.||||||||| .|.|
BPUM_2047___r 1576 CTAAGTGACAGTGGCATCAAACAGCCAGTTGATCAAAAAGAACTGCCTGA 1625
BSNT_03444___ 1613 TCAAAACA-----CAGAAATAG---------------------------- 1629
| |.|||| |||.||.||
BPUM_2047___r 1626 T-ACAACAAGTATCAGCAAAAGCAAGGGGGAAGGATTAGATGGCAGCAGT 1674
BSNT_03444___ 1629 ------ 1629
BPUM_2047___r 1675 CAGTGA 1680
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.