Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03449 and BPUM_2050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_03449___spmB.1.24716.seq
# -bsequence dna-align/BPUM_2050___spmB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03449___spmB-BPUM_2050___spmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03449___spmB-BPUM_2050___spmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03449___spmB
# 2: BPUM_2050___spmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity: 392/546 (71.8%)
# Similarity: 392/546 (71.8%)
# Gaps: 18/546 ( 3.3%)
# Score: 1350.0
#
#
#=======================================
BSNT_03449___ 1 ATGGAAATCATCAACTGGCTGTCTTTAGCCATGATTCCAATCATTATTGC 50
|||..|.|.||.||||||||.||..|.||..||||.|||.|.||.||.||
BPUM_2050___s 1 ATGTCATTTATTAACTGGCTTTCACTTGCTTTGATCCCACTGATCATCGC 50
BSNT_03449___ 51 CGGAATTCTTCTTTAT----GGAACGATCAAAAAGGTTCCGACATATGAA 96
.||.||| ||.|| |||||.||.||.|||||.|||||.||||||
BPUM_2050___s 51 AGGCATT----TTAATTGCGGGAACCATTAAGAAGGTACCGACCTATGAA 96
BSNT_03449___ 97 TCGTTTGTCGAAGGTGGGAAAGAGGGGATAGAAATTGCCTTTTCCATTAT 146
.|.||||||||.||.|||||||||||.||..|||||||||||||.||.||
BPUM_2050___s 97 ACATTTGTCGAGGGCGGGAAAGAGGGTATTCAAATTGCCTTTTCAATCAT 146
BSNT_03449___ 147 CCCCTATTTAGTCGGAATGCTTGTCGCTATAACTGTTTTCAGATCATCAG 196
.||.|||||||||||.|||||.||.||.||.||..|.|||.|..|.||.|
BPUM_2050___s 147 TCCTTATTTAGTCGGCATGCTCGTGGCCATTACGATATTCCGCGCGTCTG 196
BSNT_03449___ 197 GCGCGCTTGATTTTATAATGGATCTTTTAAAACCGGCTTTCTCCGCTATC 246
|.||.|||||.|||.|.||||..||.||||||||.|..||..|.||.|||
BPUM_2050___s 197 GTGCACTTGACTTTGTCATGGGACTGTTAAAACCCGTGTTTACAGCAATC 246
BSNT_03449___ 247 GGCATTCCTGCTGAAGTAGTGCCGCTTGCTCTGATCCGCCCGATCTCCGG 296
|||.|.||.||.|||||||||||.|||||..|.||.||.|||||.||.||
BPUM_2050___s 247 GGCTTCCCAGCAGAAGTAGTGCCACTTGCGTTTATTCGTCCGATATCTGG 296
BSNT_03449___ 297 TACGGCCGCTCTCGGAATGAC----GACCGATTTAATTGCAGTATACGGG 342
.||.||.||.|||||.||||| |||| |.|||||...|||.||.
BPUM_2050___s 297 CACAGCTGCACTCGGGATGACATCAGACC----TCATTGCGACATATGGA 342
BSNT_03449___ 343 CCCGATTCCTTTATCGG-CAGGCTGGCTTCCGTCATGCAGGGATCTACAG 391
||.|||||.|||||||| || .||.||..|.||||||||.||.||.||.|
BPUM_2050___s 343 CCAGATTCTTTTATCGGACA-ACTCGCAGCTGTCATGCAAGGGTCAACTG 391
BSNT_03449___ 392 ATACAACGCTTTACGTACTGACTGTGTATTTCGGAGCAGTCGGCATTAAA 441
|.||.||.||.|||.|..|.||.||.|||||.||.||||||||.||||||
BPUM_2050___s 392 ACACCACTCTCTACATTTTAACGGTCTATTTTGGGGCAGTCGGTATTAAA 441
BSNT_03449___ 442 AAAATGGGTGATGCATTAAAGGTGGGACTTCTTGCAGATTTAATCGGCGT 491
||||||||.|||||..|.||.||.||.||..|.|||||..|.||.|||.|
BPUM_2050___s 442 AAAATGGGAGATGCGCTGAAAGTAGGTCTGTTAGCAGACCTCATTGGCAT 491
BSNT_03449___ 492 AGTTGCATCTATCATCATCGTTACGTTATTATTTGGGAGCGCCTGA 537
..||||||||.||||||||||.|..||.||||||.|..||||||.|
BPUM_2050___s 492 CATTGCATCTGTCATCATCGTCAGTTTGTTATTTAGCGGCGCCTAA 537
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