Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03480 and BPUM_2069
See
Amino acid alignment /
Visit
BSNT_03480 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03480___spoVAF.1.24716.seq
# -bsequence dna-align/BPUM_2069___spoVAF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03480___spoVAF-BPUM_2069___spoVAF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03480___spoVAF-BPUM_2069___spoVAF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03480___spoVAF
# 2: BPUM_2069___spoVAF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1531
# Identity: 1027/1531 (67.1%)
# Similarity: 1027/1531 (67.1%)
# Gaps: 107/1531 ( 7.0%)
# Score: 3256.0
#
#
#=======================================
BSNT_03480___ 1 ATGCCGGACCACAAGGAAGAGAAAATTCGGGTTTATCGGAATCC--AGCT 48
||| |||.||||.|||.|....||.||.||..|||| ||
BPUM_2069___s 1 ATG---------AAGAAAGACAAAGTAAACGTGTACCGAGATCCGAAG-- 39
BSNT_03480___ 49 AAAAATGAAGAGTATTTCAAAAACCGTGTTGGGATGGGGACGAGCTATGA 98
|||||||||||.||.||.|||.|...|||.||.||||||...||||.|||
BPUM_2069___s 40 AAAAATGAAGATTACTTTAAAGAAAATGTCGGAATGGGGCTCAGCTTTGA 89
BSNT_03480___ 99 TGTAGGTGTTCGCAAGCTCACGATTTTA-------GATAAAGAGATCCAG 141
..|.||.||.||.|| |.|||| |||.|.||.|||||.
BPUM_2069___s 90 CCTTGGCGTGCGGAA-------AATTTATATACACGATCAGGAAATCCAA 132
BSNT_03480___ 142 CTTTACTATCTAAATGGATTATGCGATA--CAGTTTATATTATTCATTTA 189
|||||||||.||||||||.|.||||||| ||| |||.|.||..|.|||
BPUM_2069___s 133 CTTTACTATGTAAATGGACTGTGCGATACGCAG--TATGTCATCTACTTA 180
BSNT_03480___ 190 ATGAGAGAGCTTGTTGCCATTAACAATCGGAAAGAAGACCCTG-ATGAGC 238
.|.|.|||.||.||||..|| ||||...||.||| |||| ||.||.
BPUM_2069___s 181 TTAAAAGAACTAGTTGAAAT---CAATGATAATGAA---CCTGAATCAGA 224
BSNT_03480___ 239 TGGTCGACATCG---------TCGAAAACAGGCTGCTTAACGCCCAGGTC 279
| |||||.| |.||.|||.|.||..|.||....||||||
BPUM_2069___s 225 T----GACATGGCACGTGTGATTGAGAACCGTCTAGTCAATCAACAGGTC 270
BSNT_03480___ 280 GAAAAAGTAAAAACCTTGGATGAAACCACCGACCAAGTGCTGTCCGGGCT 329
..|||.||..||||..|.||||||.||...||||||||||||||.||.||
BPUM_2069___s 271 TCAAAGGTTGAAACACTCGATGAAGCCGTAGACCAAGTGCTGTCGGGCCT 320
BSNT_03480___ 330 CGTCGCTGTCATTGTTGAAGGTGCAGGTTTCGCATTTATAATTGACGTCA 379
.||.||.||..|.||||||||.|.|...|.|||||||||.|||||.||||
BPUM_2069___s 321 TGTAGCAGTTGTAGTTGAAGGCGAAAACTACGCATTTATCATTGATGTCA 370
BSNT_03480___ 380 GAAGCTATCCGGGCAGAAACCCGGAAGAACCTGATACGGAAAAGGTAGTC 429
||||||||||.|||||||..||.||.|||||.|||||.|||||.||.|||
BPUM_2069___s 371 GAAGCTATCCTGGCAGAATGCCAGAGGAACCGGATACAGAAAAAGTTGTC 420
BSNT_03480___ 430 AGAGGAGCCAGAGACGGATTTGTTGAAAATATCGTCGTCAATACGGCCCT 479
.|.||.||.|||||||||||||||||||||||..|.||||||||.||.||
BPUM_2069___s 421 CGGGGCGCAAGAGACGGATTTGTTGAAAATATTATTGTCAATACAGCGCT 470
BSNT_03480___ 480 TCTCAGAAGGCGGATCAGAGACGAGCGCCTTCGAGTCAAGATGACTAAAG 529
..|..||||.||..|..||||.||....||..||..|||.|||..|||||
BPUM_2069___s 471 CATACGAAGACGTGTGCGAGATGAAAAACTGAGATACAAAATGCTTAAAG 520
BSNT_03480___ 530 TTGGTGAGCGGTCAAAGACGGATTTAAGCATTTGTTATATAGAAGATATA 579
|.||.||.||.|||||..|||||.||.|..||||.||.||.||||||||.
BPUM_2069___s 521 TGGGCGAACGTTCAAAAGCGGATGTATGTGTTTGCTACATTGAAGATATT 570
BSNT_03480___ 580 GCTGATCCGGATCTGGTTGAGATCGTAGAAAAAGAAGTTGCATCCATTGA 629
||.||.||.|||||.||.||.|||.||||.||||||||..||...||..|
BPUM_2069___s 571 GCCGACCCAGATCTTGTCGATATCATAGAGAAAGAAGTGTCAGGAATCAA 620
BSNT_03480___ 630 TGTCGATGGATTAACAATGGCAGACAAAACTGTCGAGGAATTCATTGTTA 679
.|||||.||..|.||.|||.|.||.|||||..|.||.|||||||||.|.|
BPUM_2069___s 621 AGTCGACGGGCTGACGATGTCTGATAAAACGATTGAAGAATTCATTATAA 670
BSNT_03480___ 680 ATCAAAGCTATAATCCTTTTCCGCTCGTGCGCTATACAGAAAGACCGGAT 729
|.|||.|.||.|||||.|||||.||.||.||.||.||.||..|.||.|||
BPUM_2069___s 671 AACAAGGATACAATCCATTTCCCCTTGTACGATACACCGAGCGTCCAGAT 720
BSNT_03480___ 730 GTGGCCGCAAATCATGTTCTAGAAGGCCATGTTATCATTATAGTGGACAC 779
||.|||||.||.|||.|.||||||||.|||||.||||||||...|||.||
BPUM_2069___s 721 GTTGCCGCTAACCATATACTAGAAGGGCATGTCATCATTATTACGGATAC 770
BSNT_03480___ 780 ATCGCCGAGTGTGATCATTACCCCGACGACTTTATTTCACCATGTGCAGC 829
|||.||.||.||.||||||||.||.||.||..|.||||||||.||.||.|
BPUM_2069___s 771 ATCTCCTAGCGTCATCATTACGCCAACCACCATTTTTCACCACGTTCAAC 820
BSNT_03480___ 830 ATGCTGAAGAATATAGGCAGGCGCCTTCAGTCGGGACCTTTTTAAGATGG 879
||||.||||||||..|.|||||.|||.||||.|||||.||..||||||||
BPUM_2069___s 821 ATGCAGAAGAATACCGCCAGGCACCTGCAGTTGGGACGTTCCTAAGATGG 870
BSNT_03480___ 880 GTAAGATTTTTCGGTATTCT-TGCTTCTAC-TTTATTTCTTCCGATCTGG 927
||..|.|||||.||||||.| || |||.|| |||.||| |.|||||.|||
BPUM_2069___s 871 GTTCGCTTTTTAGGTATTTTATG-TTCAACGTTTCTTT-TACCGATTTGG 918
BSNT_03480___ 928 TTTCTCTTTGTGCTTCAGCCTGACCTGCTCTCGGACAATATGAAATTTAT 977
||.||.|||.|.|||.|.||....||.||..|.||..||.|.|..|.|||
BPUM_2069___s 919 TTCCTGTTTATCCTTGAACCAAGTCTTCTGCCAGATCATTTAAGCTATAT 968
BSNT_03480___ 978 CGGTTTAAATAAAGATACGCATATCCCGATCATCCTGCAGATATTTTTAG 1027
.|||||.||.|||....|.||||||||..|.||..|.||..|||||.|||
BPUM_2069___s 969 TGGTTTTAACAAACCGTCTCATATCCCTGTGATTTTACAAGTATTTCTAG 1018
BSNT_03480___ 1028 CTGACTTAGGAATCGAGTTTCTCAGAATGGCTGCCATTCACACCCCGACG 1077
||||.||.||..|.||.|||.|.||.||||||||.|||||.||.||.||.
BPUM_2069___s 1019 CTGATTTTGGGGTGGAATTTTTAAGGATGGCTGCAATTCATACGCCAACC 1068
BSNT_03480___ 1078 GCTTTATCAACAGCAATGGGTTTAATTGCCGCTGTTCTGATCGGGGAGAT 1127
||.||.||.||.||.|||||..|.||.||.||||||.|.||.||..|.||
BPUM_2069___s 1069 GCATTGTCGACCGCCATGGGACTGATCGCGGCTGTTTTAATTGGACAAAT 1118
BSNT_03480___ 1128 TGCGATTGAGGTCGGCCTTTTTTCTCCTGAGGTGATTCTGTACGTCTCAC 1177
|||.|||||.|||||..|.|||.|.||.||.||.||..|.||||||||||
BPUM_2069___s 1119 TGCCATTGATGTCGGTTTATTTACACCAGAAGTCATCTTATACGTCTCAC 1168
BSNT_03480___ 1178 TTGCGGCGATTGGAACCTTTACGACGCCCAGTTATGAATTAAGCTTGGCA 1227
|.||.||.||.||.||.|||||.||.||.||.||||||.|.||..|.||.
BPUM_2069___s 1169 TAGCAGCTATCGGTACATTTACAACCCCAAGCTATGAACTGAGTGTCGCC 1218
BSNT_03480___ 1228 AACAAAATGAGCCGTCTTGT---CCTCATGATA------CTCGTTGCCTT 1268
||.|||| |||| .|||||.||| ||.||.||..|
BPUM_2069___s 1219 AATAAAA---------TTGTACGACTCATCATACTAGCGCTTGTGGCGAT 1259
BSNT_03480___ 1269 ATTTCATATAAAAGGGCTCGTCATCGGATTTACAGTGCTAATTATTGCCA 1318
.|||.|..|.||.||.|||.||||.||.|||||..||.||.|.||...|.
BPUM_2069___s 1260 CTTTAAGCTGAATGGACTCATCATTGGTTTTACGTTGTTACTCATCTACT 1309
BSNT_03480___ 1319 TGGCAAGCATCAAATC---CCTT-CAGACACCGTACTTATGGCCGCTGAT 1364
| |.||||.|.|| |.|| |||||.||.||..|.|||||..|..|
BPUM_2069___s 1310 T----AACATCCATTCGTTCATTGCAGACGCCTTATATGTGGCCATTTCT 1355
BSNT_03480___ 1365 TCCCTTTAACGGAAAGGCGCTGTGGCAGGTTCTTGTCCGCACAGCGAAAC 1414
|||.||||||||.|||||..|||||||.||..|..|.||.||..|....|
BPUM_2069___s 1356 TCCTTTTAACGGGAAGGCTTTGTGGCAAGTGTTAATTCGGACCTCTGTTC 1405
BSNT_03480___ 1415 CTGGCGCAAAAGTAAGACCCAGTATCGTTCACCC-----------CAAAA 1453
|||||.||||||||||.||.||.||.||.||||| |||||
BPUM_2069___s 1406 CTGGCTCAAAAGTAAGGCCAAGCATTGTCCACCCTCAAAACAGATCAAAA 1455
BSNT_03480___ 1454 AT--CGCTTAAGGCAGCCTACCAATTCATAA 1482
|| ||| |.|||||||||
BPUM_2069___s 1456 ATTCCGC-------------CAAATTCATAA 1473
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.