Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03482 and BPUM_2071

See Amino acid alignment / Visit BSNT_03482 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_03482.1.24716.seq
#    -bsequence dna-align/BPUM_2071___spoVAEB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03482-BPUM_2071___spoVAEB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03482-BPUM_2071___spoVAEB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03482
# 2: BPUM_2071___spoVAEB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity:     267/360 (74.2%)
# Similarity:   267/360 (74.2%)
# Gaps:          18/360 ( 5.0%)
# Score: 950.0
# 
#
#=======================================

BSNT_03482         1 ATGGACTACCTTTTGGCTTTTGTCTGC-GGCGGGGCCATTTGTATCGTCG     49
                     |||||.||.|||.|.|||||||| ||| |||||....|||||..||.|.|
BPUM_2071___s      1 ATGGATTATCTTATCGCTTTTGT-TGCAGGCGGACTTATTTGCGTCATTG     49

BSNT_03482        50 GCCAGCTGCTCTTGGATATTTTTAAATTGACGCCAGCTCATGTCATGACA     99
                     |.|||||..|..|.||..|..|.|||.|||||||.||.|||||||||||.
BPUM_2071___s     50 GTCAGCTTTTACTAGACGTACTCAAACTGACGCCTGCACATGTCATGACT     99

BSNT_03482       100 TCATTTGTTGTAATCGGTGCAATATTAGATGGTTTCGGCATTTACGATAA    149
                     .|.||||||||....|||.|.||.|||||.||.|||||.|||||.|||||
BPUM_2071___s    100 ACCTTTGTTGTGGCGGGTACCATTTTAGACGGATTCGGTATTTATGATAA    149

BSNT_03482       150 ATTTATTGAATTTGCCGGAGGAGGCGCCACCGTTCCGATCGTCAGCTTCG    199
                     |||||||||||||||.||.|..||.||.|||||.||.|||||||||||.|
BPUM_2071___s    150 ATTTATTGAATTTGCGGGTGCGGGGGCAACCGTACCAATCGTCAGCTTTG    199

BSNT_03482       200 GTCACAGTCTT-CTGCACGGCGCCATGCATCAGGCGCATATACACGGATT    248
                     |.||.|| ||| ||.||.||.||.|||||||||||..||.|||||||.||
BPUM_2071___s    200 GCCATAG-CTTGCTTCATGGAGCGATGCATCAGGCAGATGTACACGGGTT    248

BSNT_03482       249 TATCGGAATCGGCATGGGGATTTTTGAGCTGACCTCGGCCGGTATCTCAG    298
                     .|||||||||||.||.||.||||||||..|.||.||.||.||.||.||||
BPUM_2071___s    249 CATCGGAATCGGGATCGGTATTTTTGAATTAACTTCTGCTGGGATTTCAG    298

BSNT_03482       299 CCGC-----TATTCT--TTTCGCCTTTATCGTAGCTGTTATTTTCAAACC    341
                     |.||     ||||||  ||||    |||||   |||.||||.||.|||||
BPUM_2071___s    299 CTGCGATTTTATTCTCATTTC----TTATC---GCTCTTATCTTTAAACC    341

BSNT_03482       342 GAAAGGATAA    351
                     ||||||||||
BPUM_2071___s    342 GAAAGGATAA    351


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