Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03501 and BPUM_2084
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_03501___fur.1.24716.seq
# -bsequence dna-align/BPUM_2084___fur.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03501___fur-BPUM_2084___fur.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03501___fur-BPUM_2084___fur.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03501___fur
# 2: BPUM_2084___fur
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity: 373/463 (80.6%)
# Similarity: 373/463 (80.6%)
# Gaps: 23/463 ( 5.0%)
# Score: 1561.5
#
#
#=======================================
BSNT_03501___ 1 ATGGAAAACCGTATTGATCGAATTAAGAAACAACTGCACTCATCCAGCTA 50
||||||||.||.||||||||||||||||||||.||.||.||.||||||||
BPUM_2084___f 1 ATGGAAAATCGGATTGATCGAATTAAGAAACAGCTTCATTCTTCCAGCTA 50
BSNT_03501___ 51 TAAACTTACGCCACAGCGTGAAGCGACAGTAAGAGTGCTGCTTGAAAACG 100
|||.||.|||||||||||||||||.||||||||.||.||||||||.||.|
BPUM_2084___f 51 TAAGCTCACGCCACAGCGTGAAGCAACAGTAAGGGTACTGCTTGAGAATG 100
BSNT_03501___ 101 AAGAAGACCATTTAAGCGCAGAAGATGTATACCTCCTCGTAAAAGAGAAA 150
||||||||||||||||.||||||||||||||||||||||||||||||||.
BPUM_2084___f 101 AAGAAGACCATTTAAGTGCAGAAGATGTATACCTCCTCGTAAAAGAGAAG 150
BSNT_03501___ 151 TCTCCTGAGATCGGTCTCGCTACAGTATACCGTACGCTTGAATTATTAAC 200
||||||||.||.|||||.|||||.||.||.||.|||.|.|||||..||||
BPUM_2084___f 151 TCTCCTGAAATTGGTCTTGCTACTGTTTATCGAACGTTAGAATTGCTAAC 200
BSNT_03501___ 201 TGAATTAAAAGTCGTAGATAAAATTAACTTTGGAGACGGTGTGTCCCGTT 250
||||.|.|||||.||.|||||||||||||||||||||||.||.||.||.|
BPUM_2084___f 201 TGAACTGAAAGTTGTTGATAAAATTAACTTTGGAGACGGCGTTTCGCGAT 250
BSNT_03501___ 251 ACGACCTTCGGAAAGAGGGCGCAGCTCACTTTCATCACCA-CTTGGTGTG 299
|.||.|||||.|||||.||.||.||||||||.|||||.|| ||| ||.||
BPUM_2084___f 251 ATGATCTTCGCAAAGAAGGAGCCGCTCACTTCCATCATCATCTT-GTCTG 299
BSNT_03501___ 300 TATGGAGTGCGGAGCCGTTGATGAAATTGAAGAAGATTTGCTTGAAGACG 349
.|||||||||||..|.||.|||||.||.|||||.|||||..|.|||||||
BPUM_2084___f 300 CATGGAGTGCGGGACAGTCGATGAGATAGAAGATGATTTATTAGAAGACG 349
BSNT_03501___ 350 TGGAAGAAATCATTGAACGTGATTGGAAATTTAAGATTAAAGATCATAGA 399
|.|||||.||.|||||||||||.|||||||||||.|||||.|||||||||
BPUM_2084___f 350 TTGAAGAGATTATTGAACGTGACTGGAAATTTAAAATTAAGGATCATAGA 399
BSNT_03501___ 400 TTGACGTTTCACGGCATTTGCCACCGCTGTAA------------CGGAAA 437
|||||.||.||.||||||||||||||.|||.| |||.||
BPUM_2084___f 400 TTGACATTCCATGGCATTTGCCACCGGTGTCATGATGATGAATCCGGCAA 449
BSNT_03501___ 438 AGAAACTGAATAG 450
|.||
BPUM_2084___f 450 ATAA--------- 453
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