Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03619 and BPUM_2159
See
Amino acid alignment /
Visit
BSNT_03619 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_03619___dxs.1.24716.seq
# -bsequence dna-align/BPUM_2159___dxs.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03619___dxs-BPUM_2159___dxs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03619___dxs-BPUM_2159___dxs.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03619___dxs
# 2: BPUM_2159___dxs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1931
# Identity: 1456/1931 (75.4%)
# Similarity: 1456/1931 (75.4%)
# Gaps: 58/1931 ( 3.0%)
# Score: 5345.5
#
#
#=======================================
BSNT_03619___ 1 TTGGATCTTTTATCAATACAGGACCCGTCGTTTTTAAAAAACATGTCCAT 50
||||||||||||||||||.|..|.||..|||||.|||||...|||||.|.
BPUM_2159___d 1 TTGGATCTTTTATCAATAAAAAATCCAACGTTTCTAAAAGGAATGTCAAA 50
BSNT_03619___ 51 TGATGAATTAG-AGAAATTAAGTGATGAAATCCGTCA-GTTTTTAATT-A 97
||..||||||| |||..|| ||.|.|||.||.|| || |||||||||| |
BPUM_2159___d 51 TGCAGAATTAGAAGAGCTT-AGCGCTGACATTCG-CATGTTTTTAATTGA 98
BSNT_03619___ 98 CAAGTTTATCC---GCT---TCCGGCGGCCACATCGGCCCAAACTTAGGT 141
|||| ||| ||.||.||.||.|||||.||.|||.|.||.
BPUM_2159___d 99 -------ATCCTTAGCTAACTCTGGTGGGCATATCGGTCCGAACCTCGGA 141
BSNT_03619___ 142 GTCGTAGAGCTTACTGTTGCCCTGCATAAGGAATTTAACAGCCCGAAAGA 191
|||||.|||||.||||||||.||.|||||.|.||||.|||||||.|||||
BPUM_2159___d 142 GTCGTTGAGCTGACTGTTGCGCTTCATAAAGTATTTGACAGCCCAAAAGA 191
BSNT_03619___ 192 CAAATTTTTATGGGATGTAGGCCATCAGTCGTATGTCCATAAGCTGCTGA 241
||||||..|.||||||||.||.||||||||.||.||.|||||||||.|.|
BPUM_2159___d 192 CAAATTCCTCTGGGATGTTGGACATCAGTCTTACGTTCATAAGCTGTTAA 241
BSNT_03619___ 242 CAGGACGCGGAAAAGAATTTGCGACGCTTCGCCAGTACAAAGGGCTTTGC 291
|.|||.|.|||...||.||||..||.||||||||.||.||||||||||||
BPUM_2159___d 242 CGGGAAGAGGATCGGAGTTTGATACACTTCGCCAATATAAAGGGCTTTGC 291
BSNT_03619___ 292 GGATTTCCAAAGCGGAGTGAAAGCGAGCACGATGTTTGGGAAACCGGGCA 341
||.||.||.||.||.|.|||||||||.||.||.||||||||.||.||.||
BPUM_2159___d 292 GGTTTCCCTAAACGAAATGAAAGCGAACATGACGTTTGGGAGACAGGTCA 341
BSNT_03619___ 342 CAGCTCGACTTCTCTGTCAGGCGCGATGGGAATGGCAGCTGCCCGTGATA 391
|||.||.||.||..|.||.||.||||||||.||||||||.||.|||||||
BPUM_2159___d 342 CAGTTCAACCTCGTTATCTGGTGCGATGGGTATGGCAGCAGCGCGTGATA 391
BSNT_03619___ 392 TTAAAGGAACGGATGAATATATTATTCCGATCATTGGTGACGGCGCGCTG 441
|.|||||.||.|||||||||||..|.|||||.||.||.||||||||.||.
BPUM_2159___d 392 TCAAAGGGACAGATGAATATATCCTGCCGATTATCGGAGACGGCGCACTA 441
BSNT_03619___ 442 ACCGGCGGTATGGCGCTCGAAGCCCTTAACCACATCGGCGACGAGAAAAA 491
|||||.|||||||||||.|||||..|.||.||.|||||.||.||.||.||
BPUM_2159___d 442 ACCGGAGGTATGGCGCTGGAAGCGTTGAATCATATCGGTGATGAAAAGAA 491
BSNT_03619___ 492 AGACATGATTGTCATCCTTAATGATAATGAAATGAGTATTGCGCCAAACG 541
|||.||||||||.|||.|.||.||.|||||||||||.|||||||||||||
BPUM_2159___d 492 AGATATGATTGTGATCTTAAACGACAATGAAATGAGCATTGCGCCAAACG 541
BSNT_03619___ 542 TCGGTGCCATTCACTCTATGCTCGGACGGCTCCGCACTGCGGGGAAATAC 591
|||||||.||||||.|.|||||.||..|..|.||.||.||.||.||||||
BPUM_2159___d 542 TCGGTGCGATTCACACAATGCTTGGCAGATTGCGTACAGCTGGCAAATAC 591
BSNT_03619___ 592 CAGTGGGTCAAAGATGAGCTTGAATACTTATTTAAAAAGATTCCGGCAGT 641
||.|||||.||.||||||||.|||||.|||||.||....|||||.||.||
BPUM_2159___d 592 CAATGGGTAAAGGATGAGCTCGAATATTTATTCAAGCGCATTCCAGCTGT 641
BSNT_03619___ 642 TGGGGGCAAGCTTGCCGCCACGGCGGAACGGGTCAAAGACAGCCTGAAAT 691
.||.||.||||||||.|||||.||.||.||..|.|||||||||||.||||
BPUM_2159___d 642 AGGTGGTAAGCTTGCTGCCACAGCAGAGCGTATTAAAGACAGCCTTAAAT 691
BSNT_03619___ 692 ACATGCTCGTCTCCGGAATGTTTTTCGAGGAGCTCGGTTTTACGTATTTG 741
|..|.||.||.||.||.|||||.||.|||||..|.||.|||||.||.||.
BPUM_2159___d 692 ATTTACTTGTATCTGGCATGTTCTTTGAGGAAATGGGGTTTACCTACTTA 741
BSNT_03619___ 742 GGCCCAGTGGACGGACATTCTTATCATGAGCTGATTGAGAATCTTCAATA 791
||.||.||.|||||||||||.|||.|.||.||..|||||||||||.||||
BPUM_2159___d 742 GGTCCTGTTGACGGACATTCATATGAAGATCTATTTGAGAATCTTGAATA 791
BSNT_03619___ 792 CGCCAAAAAAACGAAAGGCCCTGTTCTTCTGCACGTCATTACGAAAAAAG 841
.||.||.|||||.|||||.||||||||||||||.|||||.||||||||||
BPUM_2159___d 792 TGCAAAGAAAACAAAAGGTCCTGTTCTTCTGCATGTCATCACGAAAAAAG 841
BSNT_03619___ 842 GGAAGGGGTACAAACCGGCTGAGACCGATACGATTGGGACATGGCATGGT 891
|.||.||.||..|.|||||.||..||||||..||.|||||.|||||.|||
BPUM_2159___d 842 GAAAAGGCTATCAGCCGGCAGAATCCGATAAAATCGGGACTTGGCACGGT 891
BSNT_03619___ 892 ACCGGACCATATAAAATTAATACCGGTGACTTTGTAAAGCCGAAAGCCGC 941
||.||.|||||.||||||.||||.|||||.||||||||.|||..|||.||
BPUM_2159___d 892 ACGGGCCCATACAAAATTGATACAGGTGATTTTGTAAAACCGGCAGCAGC 941
BSNT_03619___ 942 AGCTCCTTCGTGGAGCGGTCTTGTCAGCGGAACTGTGCAGCGAA---TGG 988
||||||.||.|||||.|||||.|||||.|.|||.|| || ||| |||
BPUM_2159___d 942 AGCTCCGTCTTGGAGTGGTCTCGTCAGTGAAACAGT-CA--GAAAGCTGG 988
BSNT_03619___ 989 CGCGCGAGGACGGACGCATTGTAGCCATTACGCCGGCTATGCCTGTCGGT 1038
|.||.||.||.|..||.|||||.||.||.|||||.||.||||||||.|||
BPUM_2159___d 989 CACGGGAAGATGAGCGAATTGTTGCGATCACGCCTGCGATGCCTGTTGGT 1038
BSNT_03619___ 1039 TCAAAGCTTGAAGGCTTCGCAAAGGAATTCCCTGACCGGATGTTCGACGT 1088
|||||||||||||||||.|||||||||||.||.||.||||||||.||.||
BPUM_2159___d 1039 TCAAAGCTTGAAGGCTTTGCAAAGGAATTTCCAGAGCGGATGTTTGATGT 1088
BSNT_03619___ 1089 AGGAATCGCAGAACAGCATGCCGCAACAATGGCTGCAGCTATGGCAATGC 1138
||||||.||.||.||||||||.||.||||||||.||.|...|.||.|.||
BPUM_2159___d 1089 AGGAATTGCCGAGCAGCATGCAGCCACAATGGCAGCTGGGCTTGCGACGC 1138
BSNT_03619___ 1139 AGGGTATGAAGCCGTTTTTGGCGATTTACTCAACCTTCCTGCAAAGGGCA 1188
||...||||||||.|||||.||||||||.|||||.|||.|||||||.||.
BPUM_2159___d 1139 AGAACATGAAGCCATTTTTAGCGATTTATTCAACGTTCTTGCAAAGAGCC 1188
BSNT_03619___ 1189 TATGACCAAGTTGTTCATGACATCTGCCGCCAAAACGCT-AATGTGTTTA 1237
|||||.|||||..|.||.||.||.|||||||||||| || ||.||.||||
BPUM_2159___d 1189 TATGATCAAGTGCTACACGATATTTGCCGCCAAAAC-CTGAACGTATTTA 1237
BSNT_03619___ 1238 TTGGAATTGACCGTGCAGGACTCGTTGGCGCTGATGGAGAGACACATCAA 1287
||||.|||||.|||||.|||||.||.||.||.||||||||.||.||||||
BPUM_2159___d 1238 TTGGTATTGATCGTGCTGGACTTGTCGGTGCCGATGGAGAAACCCATCAA 1287
BSNT_03619___ 1288 GGCGTGTTTGATATTGCGTTTATGCGCCACATTCCAAACATGGTCTTAAT 1337
||.||.|||||||||||.||||||||.||.||.||.||.|||||..|.||
BPUM_2159___d 1288 GGTGTATTTGATATTGCCTTTATGCGTCATATGCCGAATATGGTACTGAT 1337
BSNT_03619___ 1338 GATGCCGAAAGACGAAAATGAAGGCCAGCACATGGTTCATACAGC-ACTT 1386
||||||.|||||.|||||||||||.|||||||||||..||||||| |.|.
BPUM_2159___d 1338 GATGCCAAAAGATGAAAATGAAGGACAGCACATGGTCAATACAGCTATTC 1387
BSNT_03619___ 1387 AGCTATGACGAAGGCCCGATAGCAATGCGTTTTCCGCGCGGAAACGGACT 1436
|| |||||.||.||.||.||.||.|||||.||.||||||||.|||||.||
BPUM_2159___d 1388 AG-TATGATGACGGTCCTATTGCTATGCGCTTCCCGCGCGGTAACGGGCT 1436
BSNT_03619___ 1437 CGGCGTAAAAATGGATGAACAGTTGAAAACGATTCCGATCGGTACGTGGG 1486
.||.||.|||||||||||||||.|||||||.|||||.||.||..|.||||
BPUM_2159___d 1437 AGGTGTCAAAATGGATGAACAGCTGAAAACCATTCCAATTGGGTCCTGGG 1486
BSNT_03619___ 1487 AGGTGTTGCGTCCAGGGAACGATGCTGTCATCTTAACATTCGGCACAACA 1536
|.||..|.|..||||||||.||||||||.||.||||||||.||.||.||.
BPUM_2159___d 1487 AAGTTCTTCACCCAGGGAAGGATGCTGTAATTTTAACATTTGGTACGACG 1536
BSNT_03619___ 1537 ATCGAAATGGCGATTGAAGCAGCCGAAGAGCTGCAGAAAGAAGGCCTTTC 1586
||..||||||||.||.|||||||.|||||.||.||.||||||||....||
BPUM_2159___d 1537 ATTAAAATGGCGCTTCAAGCAGCAGAAGAACTTCAAAAAGAAGGGAAATC 1586
BSNT_03619___ 1587 CGTGCGCGTTGTGAATGCGCGTTTTATTAAGCCGATTGATGAAAAGATGA 1636
.||.||.||.||.||.||.||||||||||||||..||||||||..||||.
BPUM_2159___d 1587 GGTTCGTGTGGTCAACGCTCGTTTTATTAAGCCTCTTGATGAAGCGATGT 1636
BSNT_03619___ 1637 TGAA-GAGTATCCTAAAAGAAGGCTTGCCAATTTTAACAATTGAAGAAGC 1685
|.|| || |||.||....|||||..|.|||||||||||.|||||||||||
BPUM_2159___d 1637 TAAATGA-TATTCTTTCTGAAGGTATTCCAATTTTAACGATTGAAGAAGC 1685
BSNT_03619___ 1686 GGTCTTAGAAGGCGGTTTCGGAAGC-TCGATTTTAGAATTCGCTCATGAT 1734
.||..|..|||||||.||.||.||| .|| |.|||||||.....||.|||
BPUM_2159___d 1686 TGTGCTCCAAGGCGGATTTGGCAGCAGCG-TCTTAGAATATATACACGAT 1734
BSNT_03619___ 1735 CAAGGTGAATATCATACTCCGATCGACAGAATGGGTATACCTGATCGGTT 1784
.||...|.||.|||||.|....|.||..|.|||||.||.||.|||...||
BPUM_2159___d 1735 AAAAAAGCATCTCATATTAAAGTAGAACGTATGGGCATTCCAGATGAATT 1784
BSNT_03619___ 1785 TATTGAACACGGAAGCGTAACGGCGCTTCTTAAGGAAATTGGACTGACAA 1834
||||||.||.||.||.||....||.||.|||.|.||||||||..||||.|
BPUM_2159___d 1785 TATTGAGCATGGGAGTGTTGATGCCCTGCTTGAAGAAATTGGTTTGACGA 1834
BSNT_03619___ 1835 AACAGCAGGTGGCAAATCGTATTAGA--TTAC-TGA------TGCCGT-- 1873
|....|||||.|| |.|.| |||| ||| |.||||
BPUM_2159___d 1835 AGGTACAGGTTGC--------TGACACTTTACGTGATATGCTTCCCGTAG 1876
BSNT_03619___ 1874 --CAAAGACACACAAAGGAATTGGATCATGA 1902
|.|||| ||||||||||||||||||
BPUM_2159___d 1877 CACCAAGA-----AAAGGAATTGGATCATGA 1902
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.