Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03627 and BPUM_2164
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_03627___nusB.1.24716.seq
# -bsequence dna-align/BPUM_2164___nusB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03627___nusB-BPUM_2164___nusB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03627___nusB-BPUM_2164___nusB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03627___nusB
# 2: BPUM_2164___nusB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity: 295/406 (72.7%)
# Similarity: 295/406 (72.7%)
# Gaps: 20/406 ( 4.9%)
# Score: 1082.0
#
#
#=======================================
BSNT_03627___ 1 ATGAAAAGAAGAACAGCAAGAGAAAAAGCTTTGCAGGCACTATTTCAAAT 50
||||||||||||||.|||||||||||.||..|.||..||.||||||||||
BPUM_2164___n 1 ATGAAAAGAAGAACTGCAAGAGAAAAGGCGCTACAAACATTATTTCAAAT 50
BSNT_03627___ 51 TGATGTCAGCGATATTGCAGTGAATGAAGCCATAGAACACGCACTGGATG 100
||||||.||..||||||....|||.||.|||||...|||.||||||||||
BPUM_2164___n 51 TGATGTGAGTAATATTGATCCGAAAGAGGCCATTACACATGCACTGGATG 100
BSNT_03627___ 101 AAGAAAAAACAGATCCTTTCTTTGAACAGCTTGTACACGGGGTATTGGAA 150
||.||.||.||||||||||.||.||..||||.||...|||.||..|.|||
BPUM_2164___n 101 AACAAGAATCAGATCCTTTTTTCGAGGAGCTGGTTTTCGGTGTGCTTGAA 150
BSNT_03627___ 151 CACCAAGACCAGCTGGATGAAATGATCTCCAAGCATCTGGTGAATTGGAA 200
||..|.|||.||||.|||||.|||||.||..|||||.|.|||||||||||
BPUM_2164___n 151 CAAAAGGACAAGCTCGATGACATGATTTCACAGCATTTAGTGAATTGGAA 200
BSNT_03627___ 201 GCTCGATCGGATTGCCAATGTTGACCGTGCGATTTTGCGCCTGGCAGCAT 250
.||||||||.|||||.||.||.|||.|.||.|||||..|.|||.|.|..|
BPUM_2164___n 201 ACTCGATCGTATTGCAAACGTAGACAGAGCCATTTTAAGGCTGTCTGTGT 250
BSNT_03627___ 251 ATGAAATGGCATATGCCGAAGACATTCCGGTGAATGTCTCCATGAACGAA 300
|.||.||||..|||...|||||.||.|||||.|.||||||.|||||.|||
BPUM_2164___n 251 ACGAGATGGTGTATCAAGAAGATATCCCGGTTAGTGTCTCAATGAATGAA 300
BSNT_03627___ 301 GCGATTGAGCTGGCAAAACGGTTTGGTGATGACAAAGCGACAAAGTTTGT 350
||||||||.|||||.|||...||.||||||||.||||||.|.||.|||||
BPUM_2164___n 301 GCGATTGAACTGGCCAAATTATTCGGTGATGATAAAGCGCCGAAATTTGT 350
BSNT_03627___ 351 AAACGGGGTTCTTTCTAACATTAAATCTGATATTGAACAATC-------- 392
|||.||.||.|||||.||||||||| |||.|.|
BPUM_2164___n 351 AAATGGAGTACTTTCAAACATTAAA----------AACGACCTAAAGCAG 390
BSNT_03627___ 393 --ATAG 396
||||
BPUM_2164___n 391 CAATAG 396
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