Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03646 and BPUM_2173
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_03646___spoIIIAC.1.24716.seq
# -bsequence dna-align/BPUM_2173___spoIIIAC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03646___spoIIIAC-BPUM_2173___spoIIIAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03646___spoIIIAC-BPUM_2173___spoIIIAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03646___spoIIIAC
# 2: BPUM_2173___spoIIIAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 156/207 (75.4%)
# Similarity: 156/207 (75.4%)
# Gaps: 12/207 ( 5.8%)
# Score: 624.0
#
#
#=======================================
BSNT_03646___ 1 ------------GTGAATGTCATATTTCAAATCGCCGGAGTGGGAATCGT 38
||.||.|||||.||||||||.||.|||||.||.|||||
BPUM_2173___s 1 ATGGGCGTTGATGTAAACGTCATTTTTCAAATTGCTGGAGTAGGCATCGT 50
BSNT_03646___ 39 GGTCGCTTTTTTACACACGATATTGGATCAGATGGGCAAGAAAGAATATG 88
.||.||.||..|.||.|||||.||.|||||.|||||.||.||.||.||.|
BPUM_2173___s 51 TGTGGCATTCCTCCATACGATTTTAGATCAAATGGGGAAAAAGGAGTACG 100
BSNT_03646___ 89 CTCAGTGGGTGACGCTGTTAGGTTTTATCTATATTTTATTTATGGTCGCC 138
||||||||||.||||||.|.||.||||||||.|||||.||||||||.||.
BPUM_2173___s 101 CTCAGTGGGTCACGCTGCTTGGGTTTATCTACATTTTGTTTATGGTAGCA 150
BSNT_03646___ 139 ACGATTGTAGATGACCTATTTAAAAAGATAAAAGCTGTGTTTTTATTCCA 188
||.|||||||||||..|.|||||||||||.|||||.||.|||.||||.||
BPUM_2173___s 151 ACCATTGTAGATGATTTGTTTAAAAAGATTAAAGCCGTATTTCTATTTCA 200
BSNT_03646___ 189 AGGATAG 195
|||||||
BPUM_2173___s 201 AGGATAG 207
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