Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03647 and BPUM_2174
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_03647___spoIIIAB.1.24716.seq
# -bsequence dna-align/BPUM_2174___spoIIIAB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03647___spoIIIAB-BPUM_2174___spoIIIAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03647___spoIIIAB-BPUM_2174___spoIIIAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03647___spoIIIAB
# 2: BPUM_2174___spoIIIAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 560
# Identity: 359/560 (64.1%)
# Similarity: 359/560 (64.1%)
# Gaps: 88/560 (15.7%)
# Score: 1023.5
#
#
#=======================================
BSNT_03647___ 1 ATGCTGAAGCTGCTGGGCGCTGTATTCATTGTGGTAGCGACAACATGGAC 50
|||.|.|||||..|.||||||.|.||.|||||....||.||.||.|||..
BPUM_2174___s 1 ATGTTAAAGCTCATTGGCGCTATCTTGATTGTCTCGGCTACGACTTGGGG 50
BSNT_03647___ 51 AGGTTTTGAGATGGCGAA--GATTTATACAGAACGGCCGCGGCAAATCCG 98
|||.||.|||.|.||.|| || ||||..||.||||||...|||||.||
BPUM_2174___s 51 AGGGTTCGAGTTTGCCAAACGA--TATAGTGACCGGCCGAAACAAATTCG 98
BSNT_03647___ 99 CCAGCTGCGTGCGGCGCTTCAATCCCTCGAGGCTGAAATCATGTACGGCC 148
.|||||.||....||||||||.||.||.||.||||||||.|||||.||.|
BPUM_2174___s 99 GCAGCTCCGGTTTGCGCTTCAGTCTCTTGAAGCTGAAATTATGTATGGTC 148
BSNT_03647___ 149 ATACACCGCTTCATA----CTGCTTCACAGCAGATTGCCAAACAGCTCGC 194
|.|||||.| || .||||.||.||||.||||| .||||
BPUM_2174___s 149 AAACACCTC----TAGCGCGTGCTGCAGAGCAAATTGC-------GTCGC 187
BSNT_03647___ 195 ACAG--------CCTGT--TTCAGCTCTT-------TTTTCCGCATTCAG 227
| || ||||| .||.|.|.|| ||| |||
BPUM_2174___s 188 A-AGTAGGTCCTCCTGTGAATCGGTTATTCGAACAATTT---GCA----- 228
BSNT_03647___ 228 TGATCAGCTGGACAAG--GGAAGTGATTCCGCGAAAACGGCGTG---GGA 272
||..||||| .||| ||||.|..|||.|| |||||.|| |||
BPUM_2174___s 229 -GAAAAGCTG--AAAGTCGGAACTTTTTCTGC----ACGGCATGCATGGA 271
BSNT_03647___ 273 --GCAAAG-CTTAAAGAAGGTATGG---GATACCCTGTCTTTGAAAAAAA 316
| |||| ||| .||.|.||.||| .|.|||.| |||.||||||.
BPUM_2174___s 272 ATG-AAAGTCTT-GAGGATGTTTGGAAAAAAACCGT---TTTAAAAAAAG 316
BSNT_03647___ 317 GCGAATACGAAGTGCTGAAGCAGTTTGGCGAGACGCTCGGGATTCATGAT 366
|||||||.||.|..||||||||.|||||.||.||.||.||....||||||
BPUM_2174___s 317 GCGAATATGAGGCACTGAAGCACTTTGGAGAAACACTTGGCCAGCATGAT 366
BSNT_03647___ 367 ----CGAATCTCTCAGCAAAAGCACATCAAGCTGGCGCT--GTCACATTT 410
|| |||||||||||..|.||||||||.||..| || |||||
BPUM_2174___s 367 GTCGCG----TCTCAGCAAAAATATATCAAGCTTGCTTTAGGT--CATTT 410
BSNT_03647___ 411 GGAAGCCTCTGAAG---CGGATGCTGAGCAGGCGCAAGCGAAAAATGAAA 457
|||| ||.||.| .|||.|||||....||.|||||.||||||||||
BPUM_2174___s 411 GGAA---TCAGAGGAGAAGGAAGCTGAAATCGCCCAAGCCAAAAATGAAA 457
BSNT_03647___ 458 AGATGATAAAAAGTTTGGGCTTTTT-AGCGGGCTTGTTACTCATTCTTCT 506
|.|||.|.|.|||..|.||.||||| ||| ||.||..||||.||||||.|
BPUM_2174___s 458 AAATGGTCAGAAGCCTCGGATTTTTAAGC-GGATTACTACTGATTCTTTT 506
BSNT_03647___ 507 ATTGATGTAA 516
||||||||.|
BPUM_2174___s 507 ATTGATGTGA 516
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