Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03671 and BPUM_2194

See Amino acid alignment / Visit BSNT_03671 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_03671___tasA.1.24716.seq
#    -bsequence dna-align/BPUM_2194___cotN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03671___tasA-BPUM_2194___cotN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03671___tasA-BPUM_2194___cotN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03671___tasA
# 2: BPUM_2194___cotN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 848
# Identity:     549/848 (64.7%)
# Similarity:   549/848 (64.7%)
# Gaps:         109/848 (12.9%)
# Score: 1655.0
# 
#
#=======================================

BSNT_03671___      1 ATGGGTATGAAAAAG-AAATTGAGTTTAGGAGTTGCTTCTGCAGCACTAG     49
                     ||||..|.|||||.| .|||| .|||||||.||....||.|..||..|||
BPUM_2194___c      1 ATGGCAAAGAAAAGGTCAATT-CGTTTAGGTGTATTATCAGGGGCTTTAG     49

BSNT_03671___     50 GATTAGCTTTAGTTGGAGGAGGAACATGGGCAGCATTTAACGACATTAAA     99
                     |..|.||.|||.|.||.||.||.||||||||.||.|||||.||.||..||
BPUM_2194___c     50 GCCTGGCATTAATCGGTGGGGGGACATGGGCGGCGTTTAATGATATAGAA     99

BSNT_03671___    100 ---TCAAAGGATG-CTACTTTTGCATCAGGTACGCTTGATTTATCTGCTA    145
                        .||||.|..| |||||    |..||||...|||.|||||||||||.|
BPUM_2194___c    100 ACGGCAAATGCGGTCTACT----CGACAGGAGAGCTAGATTTATCTGCAA    145

BSNT_03671___    146 AAGAGAATTCAGCGAGTG---TGAACTTATCAAATCTAAAGCCGGGAGAT    192
                     |||||||.||.|   |.|   |.|||.|.|||||..||||.||.||.|||
BPUM_2194___c    146 AAGAGAACTCCG---GCGCCATCAACCTTTCAAACTTAAAACCTGGTGAT    192

BSNT_03671___    193 ------AAGTTGACAAAGGATTTCCAATTTGAAAATAACGGATCACTTGC    236
                           |||      |||||.||..|.|||||||||||.|||||||||||
BPUM_2194___c    193 CGCATCAAG------AAGGAATTTAATTTTGAAAATAAAGGATCACTTGC    236

BSNT_03671___    237 GATCAAAGAAGTTTTAATGGCGCTTAATT---------------ATGGAG    271
                     ||||||..||||..|.|||...|||.|||               ||||||
BPUM_2194___c    237 GATCAATCAAGTGCTGATGAGTCTTGATTACAGCCAGTATCAGGATGGAG    286

BSNT_03671___    272 ATT--TTAAAGCAAACGGCGGCAGCAATACATCTCCAGAAGATTTCCTCA    319
                     .||  ..|||  |||.|||||.|..||||||.||   |||||.||.||.|
BPUM_2194___c    287 CTTCCGCAAA--AAAGGGCGGTAAGAATACAGCT---GAAGAATTTCTTA    331

BSNT_03671___    320 GCCAGTTTGAAGTGACATTGT--TGACAGTTGGAAAAGAGGGCGGCAATG    367
                     |.||||||.|.|||  |.|||  ||||.||||||...||.||.||.||||
BPUM_2194___c    332 GTCAGTTTCAGGTG--AGTGTTCTGACGGTTGGAGCCGAAGGTGGAAATG    379

BSNT_03671___    368 GTTACCCGAAAAACATTATTTTAGATGATGCGAACCTTAAAGACTTGTAT    417
                     ||||.||||||||.|||||.|||||.|.|||.|||||....||||||.||
BPUM_2194___c    380 GTTATCCGAAAAATATTATCTTAGACGCTGCAAACCTGCTTGACTTGCAT    429

BSNT_03671___    418 TTGATGTCTGCTAAAAATGATGCAG-CGGCTACTGAAAAAATCAAAAAAC    466
                     ....|..|.||.|||.|.||| ||| |.||...||||||..|        
BPUM_2194___c    430 CAACTAACGGCAAAACAGGAT-CAGACCGCATTTGAAAAGCT--------    470

BSNT_03671___    467 AAATAGAC---CC--------TAAATTCTTACATGCAAGCGGTAAAGTCA    505
                        |.|.|   ||        .||.||.|||||||.|||.||.||..|.|
BPUM_2194___c    471 ---TCGTCATGCCGTTGATGAGAAGTTTTTACATGAAAGTGGGAAGATTA    517

BSNT_03671___    506 ATGTAGCAACAATTGACGGTAAAACCGCTCCTGAATATGATGGTGTTCCA    555
                     ||||||||||..|.||.||.|.|...|||||.||.|||||.|||.|||||
BPUM_2194___c    518 ATGTAGCAACTGTGGATGGAACAGTGGCTCCAGAGTATGACGGTATTCCA    567

BSNT_03671___    556 AA-AACACCAACTGACTTCGATCAGGTTCAAATGGAA------ATCCAAT    598
                     || |||.|       .||.|||.|.|.|.||||||||      ||..|||
BPUM_2194___c    568 AAGAACCC-------GTTTGATTACGATAAAATGGAAATGATCATTGAAT    610

BSNT_03671___    599 ---TCAAAGATGATAAAACAAAAGATGAAAACGGGC-TTATGGTTCAAAA    644
                        |||   ||||..|.||.||.|||.||.|.||.| .||| .|.|||||
BPUM_2194___c    611 TTGTCA---ATGACCAGACGAAGGATAAAGATGGTCACTAT-ATCCAAAA    656

BSNT_03671___    645 TAAATATCAAGGCAACTCCATTAAGCTTCAATTCTCGTTCGAAGCTACAC    694
                     ||||||.||||||.|..|.|||.|..||.|..|.||.||||||||.||.|
BPUM_2194___c    657 TAAATACCAAGGCGATGCGATTCAAATTGATCTTTCCTTCGAAGCGACTC    706

BSNT_03671___    695 AGTGGAACGGCTTGACAAT------CAAAAAGGACCATACTGATAAAGAC    738
                     |||||||.||.||.||.||      |||||||   |||||.|||.||.|.
BPUM_2194___c    707 AGTGGAATGGTTTAACGATCAATCCCAAAAAG---CATACGGATGAAAAA    753

BSNT_03671___    739 GGTTATGTGAAAGAAAATGAAAAAGCGCACAGCGAGGATAAAAATTAA    786
                     ||.||.|||||||||||.||||||||.||||||||.||||||||.|||
BPUM_2194___c    754 GGCTACGTGAAAGAAAACGAAAAAGCACACAGCGAAGATAAAAAATAA    801


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03671 and BPUM_2194

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
