Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03698 and BPUM_2207

See Amino acid alignment / Visit BSNT_03698 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence dna-align/BSNT_03698___yqgZ.1.24716.seq
#    -bsequence dna-align/BPUM_2207___yqgZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03698___yqgZ-BPUM_2207___yqgZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03698___yqgZ-BPUM_2207___yqgZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03698___yqgZ
# 2: BPUM_2207___yqgZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     286/384 (74.5%)
# Similarity:   286/384 (74.5%)
# Gaps:           6/384 ( 1.6%)
# Score: 1030.5
# 
#
#=======================================

BSNT_03698___      1 ATGGAACAACAATTAACTTTTTACTCATATCCAAGCTGCACGTCATGCCG     50
                     || ||...|||  |.||||||||.|||||.||.|||||||||||.|||||
BPUM_2207___y      1 AT-GAGTGACA--TTACTTTTTATTCATACCCGAGCTGCACGTCTTGCCG     47

BSNT_03698___     51 AAAAACAAAACATTGGCTTAAAGCACATCAAATTGAATTTAACGAACGGC    100
                     .|||||||||||||||||.||.||..||||||||||.|||||.||.||.|
BPUM_2207___y     48 TAAAACAAAACATTGGCTAAAGGCGAATCAAATTGATTTTAAAGAGCGTC     97

BSNT_03698___    101 ATTTATTCAGAGAAACCCCGACAAGAGAAGAATTAAAGTACATTTTATCG    150
                     |..|.|||||||||||.||.||...||||||||||||..|.||..|.||.
BPUM_2207___y     98 ACCTTTTCAGAGAAACGCCAACCCTAGAAGAATTAAAAAAGATCCTTTCC    147

BSNT_03698___    151 TTAACGACAGAAGGAATTGATGAAATTTTGGCGACAAGAAGCCAGACTTT    200
                     |||||.|||||||||||.|||||||||||.||.|||.||||||||.||||
BPUM_2207___y    148 TTAACAACAGAAGGAATGGATGAAATTTTAGCCACACGAAGCCAGGCTTT    197

BSNT_03698___    201 CAAAAATTTAAATTTAAACATTGAAGAAATGACGGTAAATGAGGTGCTGG    250
                     .||||..|||||||||||.|||.|.||..|.|..|||||.|||||.||..
BPUM_2207___y    198 TAAAAGCTTAAATTTAAATATTAATGATTTAAAAGTAAACGAGGTTCTTC    247

BSNT_03698___    251 AACTTTTAATCGAGAAGCCGAAGCTTTTGCGACGCCCGATTCTAGTAGAC    300
                     |||||.|.||.||.||.||.||.||..|.|||.|.||.|||.|..|.||.
BPUM_2207___y    248 AACTTCTCATTGAAAAACCAAAACTGCTCCGAAGACCAATTATCATTGAT    297

BSNT_03698___    301 AACAAAAAGCTGGTGATTGGTTATAACCCGGGAGAACTGTTGAAGTTATC    350
                     ...||.|||.||||..|.||.|||||.||.||||||||..||||.|||||
BPUM_2207___y    298 GGAAATAAGTTGGTAGTAGGGTATAATCCCGGAGAACTCATGAAATTATC    347

BSNT_03698___    351 GAAGAAGAAAACGGTTCATCAATC---TGCATGA    381
                     .||.||||||.||.||||||||||   |.|.|.|
BPUM_2207___y    348 AAAAAAGAAAGCGATTCATCAATCAGTTTCCTAA    381


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