Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03702 and BPUM_2210

See Amino acid alignment / Visit BSNT_03702 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_03702___yqgW.1.24716.seq
#    -bsequence dna-align/BPUM_2210___yqgW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03702___yqgW-BPUM_2210___yqgW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03702___yqgW-BPUM_2210___yqgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03702___yqgW
# 2: BPUM_2210___yqgW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     125/207 (60.4%)
# Similarity:   125/207 (60.4%)
# Gaps:          42/207 (20.3%)
# Score: 399.0
# 
#
#=======================================

BSNT_03702___      1 ------------------------ATGTTACTTGTCGTGATTTTCGGCCT     26
                                             |||.|.||.|||.|.|||||.||.||
BPUM_2210___y      1 TTGATGACAAAGGGGGACTTTCACATGATGCTCGTCATTATTTTTGGTCT     50

BSNT_03702___     27 TGTCGCTCTTTTCGCTTTA-TGGGGAGTCTTGCGTTCTGTTAGAAATAAA     75
                     .|||.|..||||.|||..| |.|||| |||..|||||..|   |||.|||
BPUM_2210___y     51 AGTCACGATTTTAGCTGCACTCGGGA-TCTATCGTTCACT---AAAAAAA     96

BSNT_03702___     76 ---AATATACTCG-----GGTTTTTATTAGCCGGTGCCACCTTATTTGTC    117
                        |||.||||.|     |.||||     ||.||.||.||.||.||.||.
BPUM_2210___y     97 GTGAATGTACTTGCCATCGCTTTT-----GCTGGCGCAACATTTTTGGTT    141

BSNT_03702___    118 TTTGGATGGTTTACCGTGATGACCGTAATAAACAGCGGGTATCCAACCGC    167
                     |||||.||||||||.||.||||||.|.||..|.|||||.||||||||.||
BPUM_2210___y    142 TTTGGCTGGTTTACTGTCATGACCATCATCTATAGCGGTTATCCAACTGC    191

BSNT_03702___    168 ACATTAA    174
                     |||||||
BPUM_2210___y    192 ACATTAA    198


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