Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03724 and BPUM_2222
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:15
# Commandline: needle
# -asequence dna-align/BSNT_03724___yqzC.1.24716.seq
# -bsequence dna-align/BPUM_2222___yqzC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03724___yqzC-BPUM_2222___yqzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03724___yqzC-BPUM_2222___yqzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: BPUM_2222___yqzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity: 335/517 (64.8%)
# Similarity: 335/517 (64.8%)
# Gaps: 68/517 (13.2%)
# Score: 995.0
#
#
#=======================================
BSNT_03724___ 1 ATGAC----AAAACGGGGCATTCAGGCATTTGCTGGCGGCATCATTTTAG 46
||||| |||| ||||.||..|.|||||.|..||.||.|||.|.|
BPUM_2222___y 1 ATGACGAAAAAAA----GCATCCAAACGTTTGCAGCAGGTATGATTCTTG 46
BSNT_03724___ 47 CGACAGCCGTTCTTGCAGCT-GTTTTTTATCTGACTGACGAAGACCAGGC 95
|.||.|..|||||.|| |.| |||||||..||.||||...|||||.|.||
BPUM_2222___y 47 CAACTGGAGTTCTGGC-GATCGTTTTTTTCCTCACTGGAAAAGACGATGC 95
BSNT_03724___ 96 CGCTGCTG---------TAAAAGATA-------ATAAAACAGTAACTGAA 129
.||.|||| .||||||.| |.|.|| ||||||.||.
BPUM_2222___y 96 AGCAGCTGATACAACAACAAAAGAAACCCTCGCACAGAA-AGTAACAGAC 144
BSNT_03724___ 130 CAAGACGTGAACAATTACCTTGATTCTAAAAAAATGGTTTCTGTGAACCG 179
.||||||||||.||.||..|.||.||.||||||...||..||||.|.|||
BPUM_2222___y 145 AAAGACGTGAAAAACTATTTAGACTCCAAAAAAGAAGTCACTGTCAGCCG 194
BSNT_03724___ 180 TGATGAA--TATCAAAAACTTCTTGATTCAAAAGAGAAATCGTTG----- 222
||| || ||.||..|.||||||||.|..||.||.|||.||.||
BPUM_2222___y 195 TGA--AACGTACCAGCAGCTTCTTGACTATAAGGAAAAAGCGCTGAAGGC 242
BSNT_03724___ 223 -ACCGATGACAGCAG---CTCAGA------CACGAAAACA-GAC------ 255
|..||.|||.|| | ||.||| .||.||||.| |||
BPUM_2222___y 243 AAATGAAGACGGC-GATTCTAAGAATGATCAACAAAAAGAGGACAAGCCT 291
BSNT_03724___ 256 AAAGTCAAAACGTACAAGCTCAAA------ATTAAAGATGGCATGAGCAC 299
||||.|||| .||| ||||| ||||||.|.||.|||||.||
BPUM_2222___y 292 AAAGGCAAA----TCAA--TCAAATTTGTGATTAAAAACGGTATGAGTAC 335
BSNT_03724___ 300 TGCGGATGTATCTGCTATTCTTGAAAAAGAGGGCATTATCTCTTCGGCTC 349
....|||||.||.|..||.||||||||.||.|||||.|||...|||.||.
BPUM_2222___y 336 AAGTGATGTTTCAGACATGCTTGAAAAGGACGGCATCATCAACTCGTCTA 385
BSNT_03724___ 350 AAGACTTTAATGACTATGTCATTGATGCCGGCTATCACAAAGAAATTCGT 399
||||.||.|||||.||.||.|||||.|||||.||.||.||||||||||||
BPUM_2222___y 386 AAGATTTCAATGATTACGTGATTGACGCCGGTTACCATAAAGAAATTCGT 435
BSNT_03724___ 400 GCCGGCGAGTTTAAAGTAAAATCAGACATGA-GTTTCAAAAAGATCGTAA 448
||.|||.|.||.||..|||||.|||..|||| |||| |||.|||||||.|
BPUM_2222___y 436 GCAGGCAAATTCAATTTAAAAACAGGAATGACGTTT-AAACAGATCGTCA 484
BSNT_03724___ 449 AAACGTTAACACGATAA 465
||.|.||||||..||||
BPUM_2222___y 485 AAGCCTTAACAAAATAA 501
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