Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03784 and BPUM_2273

See Amino acid alignment / Visit BSNT_03784 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence dna-align/BSNT_03784___yqeY.1.24716.seq
#    -bsequence dna-align/BPUM_2273___yqeY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03784___yqeY-BPUM_2273___yqeY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03784___yqeY-BPUM_2273___yqeY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03784___yqeY
# 2: BPUM_2273___yqeY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     371/459 (80.8%)
# Similarity:   371/459 (80.8%)
# Gaps:          21/459 ( 4.6%)
# Score: 1521.0
# 
#
#=======================================

BSNT_03784___      1 ATGAGTCTTCTTGAGC-------GTCTCAACCAGGATATGAAGCTGTAT-     42
                     ||||||||||||||||       .|||       ||||||||||| ||| 
BPUM_2273___y      1 ATGAGTCTTCTTGAGCAATTAAATTCT-------GATATGAAGCT-TATG     42

BSNT_03784___     43 ATGAAAAACCGTGAGAAAGACAAACTGACTGTCGTTCGAATGGTTAAGGC     92
                     |||||||||||||||||||||||.||...||||.||||.|||||.|||||
BPUM_2273___y     43 ATGAAAAACCGTGAGAAAGACAAGCTTGTTGTCATTCGGATGGTAAAGGC     92

BSNT_03784___     93 TTCACTTCAAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGAGG    142
                     |||.||.||||||||||||||||||||||||||||||||||||||||..|
BPUM_2273___y     93 TTCGCTCCAAAATGAAGCAATTAAGCTTAAGAAAGACAGTTTGACCGGCG    142

BSNT_03784___    143 ATGAGGAACTCACTGTCCTTTCTCGTGAACTTAAGCAACGTAAAGACTCC    192
                     ||||||||||.||.||||||||.||.||..||||||||||||||||||||
BPUM_2273___y    143 ATGAGGAACTAACCGTCCTTTCCCGCGAGATTAAGCAACGTAAAGACTCC    192

BSNT_03784___    193 CTCCAGGAATTTTCAAACGCTAATCGTTTAGATTTAGTAGATAAAGTTCA    242
                     |||||.||||||||.||.||||||||.|||||||||||||||||||||||
BPUM_2273___y    193 CTCCATGAATTTTCGAAAGCTAATCGCTTAGATTTAGTAGATAAAGTTCA    242

BSNT_03784___    243 AAAAGAGCTGGACATTTTAGAAGTTTATTTACCTGAGCAGCTGTCAGAAG    292
                     |||||||.|.|||||.|||||.||||||||||||||.|||||.||.||||
BPUM_2273___y    243 AAAAGAGATTGACATCTTAGACGTTTATTTACCTGAACAGCTTTCTGAAG    292

BSNT_03784___    293 AAGAGCTGCGTACAATCGTAAATGATACCATCGCGGAGGTCGGTGCGAGC    342
                     ||||.||||..||.|||||.||.||.||.||||..||....|||||....
BPUM_2273___y    293 AAGAACTGCAAACGATCGTGAAAGAGACGATCGATGAAACAGGTGCTTCA    342

BSNT_03784___    343 TCAAAAGCGGACATGGGCAAAGTGATGGGGGCAATTATGCCTAAAGTAAA    392
                     ||.||.||.||.|||||.|||||.|||.|.||.||||||||.||||||||
BPUM_2273___y    343 TCGAAGGCTGATATGGGTAAAGTCATGAGCGCTATTATGCCAAAAGTAAA    392

BSNT_03784___    393 AGGTAAAGCTGACGGAAGTTTAATTAATAAACTTGTGAGC-AGTCAACTG    441
                     ||||||||||||.|||..|.|.|||||.|.||||||.||| || ||.|||
BPUM_2273___y    393 AGGTAAAGCTGATGGAGCTGTCATTAACAGACTTGTCAGCGAG-CAGCTG    441

BSNT_03784___    442 TCTTAA---    447
                     |||.||   
BPUM_2273___y    442 TCTCAATAA    450


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