Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03814 and BPUM_2296
See
Amino acid alignment /
Visit
BSNT_03814 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence dna-align/BSNT_03814___yqeL.1.24716.seq
# -bsequence dna-align/BPUM_2296.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03814___yqeL-BPUM_2296.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03814___yqeL-BPUM_2296.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03814___yqeL
# 2: BPUM_2296
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity: 270/367 (73.6%)
# Similarity: 270/367 (73.6%)
# Gaps: 20/367 ( 5.4%)
# Score: 986.5
#
#
#=======================================
BSNT_03814___ 1 ----ATGAACCAAAAGTCCATTTTAAAGATCGCAGCTGCGGCTTGCGACG 46
||..|.|| ||.||||||||..|||||||.|..||.|||||.|
BPUM_2296 1 ATGGATTCATCA----TCAATTTTAAACGTCGCAGCAGGAGCATGCGATG 46
BSNT_03814___ 47 ATAAACGGGCAGAGGATATTTTAGCACTGGATATGGAAGGTATTTCTCTG 96
||||||||||.|||||||||.|.||.||..|||||.||||.||.||.||.
BPUM_2296 47 ATAAACGGGCTGAGGATATTATTGCCCTTAATATGCAAGGGATCTCACTT 96
BSNT_03814___ 97 GTTGCTGATTATTTTCTGATCTGTCACGGAAATTCAGATAAACAGGTACA 146
|||||.|||||||||||.||.||||||||.||.||.||||||||.||.||
BPUM_2296 97 GTTGCCGATTATTTTCTCATTTGTCACGGGAACTCTGATAAACAAGTGCA 146
BSNT_03814___ 147 GGCGATTGCCCGTGAAATCAAGGATCAGGCTGATGAAAACGGCATTCAAG 196
|||.||.||..|.|||.|.||..|||..||.||.||||..||.|||.|||
BPUM_2296 147 GGCCATAGCAAGAGAAGTAAAACATCTTGCAGAGGAAAGTGGAATTGAAG 196
BSNT_03814___ 197 TCAAAAAGATGGAAGGCTTTGATGAAGCAAGATGGGTTCTCGTTGATCTA 246
|.||.||||||||.|||||||||||||||||||||||..|..|||||||.
BPUM_2296 197 TGAAGAAGATGGAGGGCTTTGATGAAGCAAGATGGGTATTGATTGATCTT 246
BSNT_03814___ 247 GGCGATGTGATTGTCCATGTCTTCCACAAGGACGAAAGAAGCTACTACAA 296
||.|||||.||||..||.||.||||||||.||.||||||.|.|||||.||
BPUM_2296 247 GGTGATGTCATTGCTCACGTGTTCCACAAAGAAGAAAGAGGATACTATAA 296
BSNT_03814___ 297 CCTTGAAAAGCTGTGGGGAGACGCTCCGCTCGCAGA-----TCTTGACCT 341
|||.||.|||||.||||||||.||.||| ||| .|||...||
BPUM_2296 297 CCTAGAGAAGCTATGGGGAGATGCGCCG-----AGAGAAACGCTTTCACT 341
BSNT_03814___ 342 TGGAATGAA-TCAATGA 357
|||.||.|| || ||||
BPUM_2296 342 TGGCATTAACTC-ATGA 357
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.