Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03966 and BPUM_2367

See Amino acid alignment / Visit BSNT_03966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence dna-align/BSNT_03966___greA.1.24716.seq
#    -bsequence dna-align/BPUM_2367___greA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03966___greA-BPUM_2367___greA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03966___greA-BPUM_2367___greA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03966___greA
# 2: BPUM_2367___greA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     387/474 (81.6%)
# Similarity:   387/474 (81.6%)
# Gaps:           0/474 ( 0.0%)
# Score: 1587.0
# 
#
#=======================================

BSNT_03966___      1 ATGGCACAAGAGAAAGTTTTTCCTATGACTGCAGAAGGAAAACAAAAACT     50
                     |||||||||||||||||.|||||.|||||.|.|||||||||||..||..|
BPUM_2367___g      1 ATGGCACAAGAGAAAGTATTTCCAATGACAGAAGAAGGAAAACTTAAGTT     50

BSNT_03966___     51 TGAACAAGAATTAGAATATTTGAAAACGGTTAAACGAAAAGAAGTAGTAG    100
                     .|||.||||..|.|||||||||||||||||||||||.|||||.||.||||
BPUM_2367___g     51 AGAAGAAGAGCTTGAATATTTGAAAACGGTTAAACGTAAAGAGGTTGTAG    100

BSNT_03966___    101 AGCGAATCAAAATTGCGAGAAGCTTCGGAGACCTTTCCGAGAACTCTGAA    150
                     ||||.||.|||||||||||||||||.||||||||.||.||||||||.|||
BPUM_2367___g    101 AGCGTATTAAAATTGCGAGAAGCTTTGGAGACCTCTCTGAGAACTCGGAA    150

BSNT_03966___    151 TACGATTCAGCGAAAGAAGAGCAGGCATTTGTAGAGGGCCGCGTGACGAC    200
                     ||.|||||.||.|||||||||||.||.||||||||.||.||..|.||.||
BPUM_2367___g    151 TATGATTCTGCTAAAGAAGAGCAAGCGTTTGTAGAAGGGCGTATCACTAC    200

BSNT_03966___    201 TCTTGAAAATATGATTCGCAATGCGAAAATCATTGAAGATGACGGCGGCT    250
                     .|||||.|||||||||||||||||.|||||.||.||||||||.||...||
BPUM_2367___g    201 GCTTGATAATATGATTCGCAATGCCAAAATTATCGAAGATGAAGGAAACT    250

BSNT_03966___    251 CTAACGTTGTCGGTTTGGGTAAAACCGTCACTTTCGTCGAACTGCCTGAC    300
                     |.||..|||||....|.||||||||.|||||||||||.|||.|.||.|||
BPUM_2367___g    251 CAAATATTGTCTCACTTGGTAAAACAGTCACTTTCGTTGAATTACCAGAC    300

BSNT_03966___    301 GGTGATGAAGAATCATATACGATCGTCGGAAGCGCGGAAGCTGACCCGTT    350
                     ||.||.|||||.||.||.||.|||||.|||||.||.||||||||.|||||
BPUM_2367___g    301 GGAGAAGAAGAGTCTTACACCATCGTTGGAAGTGCAGAAGCTGATCCGTT    350

BSNT_03966___    351 TGAAGGGAAAATCTCAAACGATTCACCGATCGCAAAAAGCCTCTTGGGCA    400
                     ||||||.||.||.||||||||||||||.||.|||||||||.|.||.||||
BPUM_2367___g    351 TGAAGGAAAGATTTCAAACGATTCACCAATTGCAAAAAGCTTATTAGGCA    400

BSNT_03966___    401 AAAAAGTAGATGAAGAAGTCACAGTACAAACACCGGGCGGAGAAATGCTT    450
                     ||.|||||||.||..||||.||.||.||||||||.|||||.||||||.|.
BPUM_2367___g    401 AACAAGTAGACGACAAAGTAACCGTTCAAACACCTGGCGGGGAAATGTTC    450

BSNT_03966___    451 GTGAAAATTGTGAAAATTTCATAA    474
                     ||..|||||||.||||||||||||
BPUM_2367___g    451 GTCCAAATTGTAAAAATTTCATAA    474


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