Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03969 and BPUM_2370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_03969___yrrO.1.24716.seq
# -bsequence dna-align/BPUM_2370___yrrO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03969___yrrO-BPUM_2370___yrrO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03969___yrrO-BPUM_2370___yrrO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03969___yrrO
# 2: BPUM_2370___yrrO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1288
# Identity: 988/1288 (76.7%)
# Similarity: 988/1288 (76.7%)
# Gaps: 38/1288 ( 3.0%)
# Score: 3711.5
#
#
#=======================================
BSNT_03969___ 1 ATGACTGCCGTA---AATGATAAAATATCCACAATCGTTAATGGAAAGCG 47
||| ||..|| ||.|||...||.||...|||..||.|.||.||.||
BPUM_2370___y 1 ATG---GCACTATTGAAAGATGGTATTTCTGAAATGATTGACGGGAAACG 47
BSNT_03969___ 48 TGTGATTACGAAAAAGCCGGAACTTCTCGCACCTGCGGGTAATCTT-GAA 96
|||.|||||.|||||.||.|||||.||.|||||.||.|| ||.||| |||
BPUM_2370___y 48 TGTCATTACAAAAAAACCAGAACTGCTTGCACCAGCAGG-AAACTTGGAA 96
BSNT_03969___ 97 AAGCTGAAAATCGCTGTTCATTACGGAGCGGACGCGGTCTTTATCGGGGG 146
|||||||||||.|||||.|||||||||||.|||||.||||||||.||.||
BPUM_2370___y 97 AAGCTGAAAATTGCTGTACATTACGGAGCAGACGCCGTCTTTATTGGTGG 146
BSNT_03969___ 147 ACAGGAATACGGGCTTCGCTCGAATGCCGATAACTTTACGATCGAAGAAA 196
|.|.||||..||.|||||.||.|||||||||||||||.|.||.|||||||
BPUM_2370___y 147 AAAAGAATTTGGACTTCGTTCAAATGCCGATAACTTTTCAATTGAAGAAA 196
BSNT_03969___ 197 TTGCAGAAGGCGTTGAATTCGCAAAGAAATATGGCGCGAAG-ATCTACGT 245
|.||.|||||.||.|.|||.|||||.|.|||.||.|| |.| ||||||||
BPUM_2370___y 197 TGGCTGAAGGTGTCGCATTTGCAAATAGATACGGTGC-ACGCATCTACGT 245
BSNT_03969___ 246 AACAACGAATATTTTCGCTCATAATGAAAACATGGACGGGCTTGAAGACT 295
.|||||||||||.||.||.||.||.|||||||||||||||||.||.||.|
BPUM_2370___y 246 GACAACGAATATCTTTGCCCACAACGAAAACATGGACGGGCTGGAGGAAT 295
BSNT_03969___ 296 ATTTAAAAGCGCTTGGAGACGCCAACGTTGCCGGTATTATTGTGGCAGAT 345
|..|..|||.|.|||.||..||....||.||.||.|||||.|||||.||.
BPUM_2370___y 296 ACCTTCAAGGGATTGAAGGTGCTGGAGTAGCAGGCATTATCGTGGCTGAC 345
BSNT_03969___ 346 CCGCTTATTATTGAAACATG----CCGCAGAGTGGCGCCGAATGTTGAGG 391
||.||.||.||||||||.|| | |.||.||.|||||..||||.|
BPUM_2370___y 346 CCACTGATCATTGAAACGTGTAAAC----GTGTCGCACCGAAGCTTGAAG 391
BSNT_03969___ 392 TTCACTTGAGCACACAGCAGTCTCTTTCAAACTGGAAGGCTGTCCAGTTC 441
|.||.||.|||||||||||.||||||||.||||||||.|||||.|||||.
BPUM_2370___y 392 TCCATTTAAGCACACAGCAATCTCTTTCGAACTGGAAAGCTGTTCAGTTT 441
BSNT_03969___ 442 TGGAAGGAAGAAGGTCTCGACCGCGTCGTGCTGGCACGTGAAACTAGCGC 491
|||||.||||||||.||.||.||.||.||||||||.||.||.|||||.||
BPUM_2370___y 442 TGGAAAGAAGAAGGGCTTGAGCGAGTGGTGCTGGCTCGCGAGACTAGTGC 491
BSNT_03969___ 492 TCTTGAAATCAGAGAAATGAAAGAAAAGGTAGATATCGAAATCGAATCCT 541
.||.|||||.||||||||||||||||||||.|||||.|||||.|||.|.|
BPUM_2370___y 492 GCTAGAAATTAGAGAAATGAAAGAAAAGGTCGATATTGAAATTGAAACGT 541
BSNT_03969___ 542 TCATTCATGGCGCAATGTGTATCGCATATTCCGGCCGCTGCGTGCTGAGC 591
|||||||.||.||.||||||||.||.||.||.||||||||||||||.||.
BPUM_2370___y 542 TCATTCACGGTGCGATGTGTATTGCTTACTCTGGCCGCTGCGTGCTCAGT 591
BSNT_03969___ 592 AATCACATGACAGCGCGGGATTCCAACCGCGGAGGCTGCTGCCAGTCATG 641
||.||.|||||.||..|.|||||.||||||||.||||||||||||||.||
BPUM_2370___y 592 AACCATATGACGGCAAGAGATTCTAACCGCGGTGGCTGCTGCCAGTCTTG 641
BSNT_03969___ 642 CCGCTGGGATTATGATCTCTATCAAAC-AGACGGT-----GCCAACGCCG 685
||||||||||||||||||.||| |||| |||.||| |..|.|||
BPUM_2370___y 642 CCGCTGGGATTATGATCTTTAT-AAACTAGAAGGTTCTGAGGAAGCGC-- 688
BSNT_03969___ 686 TTGCTTTGTATGGTGAAGAAGATGCACCATTTGCGATGAGCCCGAAAGAT 735
|.||.|.|||.||.|||||.|||||||||||||||||.||.||||||
BPUM_2370___y 689 ---CATTATTTGGAGAGGAAGACGCACCATTTGCGATGAGTCCAAAAGAT 735
BSNT_03969___ 736 TTGAAGCTGATTGAATCCATTCCGAAAATGATCGAAATGGGAATAGACAG 785
||.||.|||||.|||||||||||..|||||||.|||||||||||.|||||
BPUM_2370___y 736 TTAAAACTGATCGAATCCATTCCTCAAATGATTGAAATGGGAATTGACAG 785
BSNT_03969___ 786 CTTAAAGATTGAAGGCCGCATGAAATCCATTCACTATGTAGCAACTGTTG 835
|||.||.||.|||||.||.||||||||||||||.|||||.|||||.||.|
BPUM_2370___y 786 CTTGAAAATCGAAGGGCGTATGAAATCCATTCATTATGTGGCAACGGTCG 835
BSNT_03969___ 836 TCAGCGTATACCGCAAAGTAATCGATGCTTATTGCGCTGATCCAGAGAAC 885
|.||.||.||.||||||||.|||||.||.|||||.||.||.|||||.||.
BPUM_2370___y 836 TGAGTGTGTATCGCAAAGTCATCGACGCCTATTGTGCGGACCCAGACAAT 885
BSNT_03969___ 886 TTTGTGATTCAAAAAGAATGGCTTGAAGAGCTCGATAAGTGCGCCAACCG 935
|||||.|||.|..|.||||||.|.||.||..|.|||||.||.||.|||||
BPUM_2370___y 886 TTTGTCATTGAGCAGGAATGGTTAGATGAATTAGATAAATGTGCAAACCG 935
BSNT_03969___ 936 GGACACTGCGACAGCTTTCTTTGAAGGAACGCCAGGCTATGAAGAGCAAA 985
.|||||.||..||||.||.||.|||||....|||||....||.|||||||
BPUM_2370___y 936 TGACACAGCACCAGCCTTTTTCGAAGGTGTACCAGGAACGGATGAGCAAA 985
BSNT_03969___ 986 TGTTCGGCGAACACGCCAAGAAAACGACATATGATTTTGTCGGCTTAGTG 1035
||||.|||...||.|..|||||||||||.|.||||||||..||..|.||.
BPUM_2370___y 986 TGTTTGGCATTCATGGGAAGAAAACGACTTTTGATTTTGCAGGTCTCGTT 1035
BSNT_03969___ 1036 CTGAATTATGATGAAGATACACAAATGGTCACGCTTCAGCAACGCAATTT 1085
||..|||||||||||.|...||||||.|||||..|.|||||.||.||.||
BPUM_2370___y 1036 CTTCATTATGATGAAAAAGAACAAATTGTCACATTGCAGCAGCGTAACTT 1085
BSNT_03969___ 1086 CTTCAAAAAAGGCGACGAAGTGGAATTTTTCGGTCCAGAAATCGAAAACT 1135
|||.|||...||.||||||||.|||||||||||.||||||||.||.||
BPUM_2370___y 1086 CTTTAAAGCTGGTGACGAAGTTGAATTTTTCGGCCCAGAAATTGAGAA-- 1133
BSNT_03969___ 1136 TTACACAT---ACGATTGAAACCATTTGGGACGAAGACGGAAATGAGCTA 1182
||.||||| || |||||.||.||||||||.|||.|.||||||||.||.
BPUM_2370___y 1134 TTTCACATGCAAC-ATTGAGACGATTTGGGATGAAAAAGGAAATGAACTT 1182
BSNT_03969___ 1183 GATGCTGCCCGCCATCCCCTGCAAATTGTCAAATTCAAACTAGA-CAAAA 1231
|||||.||.||.|||||.||.|||||.|||||||||||.||.|| |||||
BPUM_2370___y 1183 GATGCCGCTCGTCATCCGCTTCAAATCGTCAAATTCAAGCTCGATCAAAA 1232
BSNT_03969___ 1232 AGATTTATCCGAGCAACATGATGAGAAAGGGGAAGTAA 1269
|| |.||.||.|||||||||||||||||||||||.|||
BPUM_2370___y 1233 AG-TATACCCTAGCAACATGATGAGAAAGGGGAAATAA 1269
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