Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04053 and BPUM_2431

See Amino acid alignment / Visit BSNT_04053 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence dna-align/BSNT_04053___pheB.1.24716.seq
#    -bsequence dna-align/BPUM_2431___pheB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04053___pheB-BPUM_2431___pheB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04053___pheB-BPUM_2431___pheB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04053___pheB
# 2: BPUM_2431___pheB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity:     336/446 (75.3%)
# Similarity:   336/446 (75.3%)
# Gaps:           4/446 ( 0.9%)
# Score: 1235.0
# 
#
#=======================================

BSNT_04053___      1 ATGAAAGAGGAGACATTTTATCTTGTCCGTGAAGATGTATTGCCCGATGC     50
                     .|||||||.||.||.||.|||.|.||..|.||.|||||..|.||.|||||
BPUM_2431___p      1 GTGAAAGAAGAAACGTTCTATTTAGTAAGAGAGGATGTCCTTCCAGATGC     50

BSNT_04053___     51 AATGAGAAAAACATTAGAAGTCAAAAAGCTGCTTGATCGAAAAAAAGCAG    100
                     .|||.|||||||..|.||||||||||||||.||.|||||.||||||||.|
BPUM_2431___p     51 GATGCGAAAAACGCTTGAAGTCAAAAAGCTTCTCGATCGCAAAAAAGCGG    100

BSNT_04053___    101 ATTCAGTAGCAGATGCCGTTCAAAAGGTCGATTTAAGCAGAAGTGCGTTT    150
                     |||||||.||.|||||.||||||.|.|..|||||||||.|.|||||.|||
BPUM_2431___p    101 ATTCAGTTGCCGATGCTGTTCAACAAGCGGATTTAAGCCGCAGTGCTTTT    150

BSNT_04053___    151 TATAAATACAGGGATGCTGTTTTTCCATTCTACACCATGGTAAAAGAACA    200
                     |||||||||||.|||||||||||||||||.||.||.|||||.|||||.||
BPUM_2431___p    151 TATAAATACAGAGATGCTGTTTTTCCATTTTATACGATGGTGAAAGAGCA    200

BSNT_04053___    201 AATTATCACACTTTTCTTTCATTTGGAGGATAGGTCAGGTGCGTTATCTC    250
                     .||.||||||.|.||.||.||..|.||||||.||||.||.||  |.|.||
BPUM_2431___p    201 GATCATCACATTGTTTTTCCACCTTGAGGATCGGTCTGGGGC--TCTGTC    248

BSNT_04053___    251 A--GCTTCTTCAGGCGGTAGCTGATTCTGGAAGCAACGTTCTTTCCATTC    298
                     |  .||.|||||....||.|||||.|||||..|.||.||..|.|||||||
BPUM_2431___p    249 AAGACTACTTCAAATTGTGGCTGACTCTGGCTGTAATGTGTTATCCATTC    298

BSNT_04053___    299 ACCAGACCATTCCGCTTCAAGGCAGAGCAAATGTGACACTGTCTATCAGT    348
                     ||||.||.||||||||.||.||.|||||.|||||.||.||.||.||.||.
BPUM_2431___p    299 ACCAAACGATTCCGCTGCAGGGAAGAGCGAATGTCACCCTATCCATTAGC    348

BSNT_04053___    349 ACGTCGGCAATGGAAGAAGACATTCATACATTAATGAATAAGCTCAGGAA    398
                     |||.|.|.|||||.|||.||.||..|||||.|.||||||.|..|.||.||
BPUM_2431___p    349 ACGGCTGGAATGGCAGATGATATCAATACAGTCATGAATCAATTAAGAAA    398

BSNT_04053___    399 GTTTGATTTTGTAGAAAAGGTTGAAATATTAGGTTCAGGTGCATAA    444
                     ..||||.|||||.|||||.||||||||..|||||||.||.||.|||
BPUM_2431___p    399 ACTTGAATTTGTCGAAAAAGTTGAAATTCTAGGTTCTGGGGCGTAA    444


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