Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04054 and BPUM_2432

See Amino acid alignment / Visit BSNT_04054 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence dna-align/BSNT_04054___obgE.1.24716.seq
#    -bsequence dna-align/BPUM_2432___obgE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04054___obgE-BPUM_2432___obgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04054___obgE-BPUM_2432___obgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04054___obgE
# 2: BPUM_2432___obgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1296
# Identity:    1010/1296 (77.9%)
# Similarity:  1010/1296 (77.9%)
# Gaps:          18/1296 ( 1.4%)
# Score: 3826.5
# 
#
#=======================================

BSNT_04054___      1 ATGTTTGTAGATCAGGTCAAAGTATATGTAAAAGGCGGCGACGGCGGCAA     50
                     |||||||||||||||||.|||||.|||||.||||||||.||||||||.||
BPUM_2432___o      1 ATGTTTGTAGATCAGGTTAAAGTGTATGTTAAAGGCGGTGACGGCGGAAA     50

BSNT_04054___     51 CGGTATGGTTGCGTTTCGCCGTGAAAAATATGTGCCGAAAGGCGGCCCTG    100
                     |||||||||.||||||||.|||||||||||||||||.||||||||.||.|
BPUM_2432___o     51 CGGTATGGTGGCGTTTCGTCGTGAAAAATATGTGCCAAAAGGCGGACCGG    100

BSNT_04054___    101 CCGGCGGTGACGGAGGAAAGGGAGGAGACGTCGTTTTTGAAGTAGATGAA    150
                     |.|||||.|||||.|||||.||.|.|||.||.||.|||||||||||.|||
BPUM_2432___o    101 CTGGCGGCGACGGTGGAAATGGTGCAGATGTGGTATTTGAAGTAGACGAA    150

BSNT_04054___    151 GGTCTCCGCACCCTGATGGATTTTAGATACAAAAAACACTTTAAAGCGAT    200
                     ||.|||.|.||..|||||||.|||.|.||||||...||.|||||.|||..
BPUM_2432___o    151 GGACTCAGAACATTGATGGACTTTCGTTACAAACGCCATTTTAAGGCGGA    200

BSNT_04054___    201 TCGCGGCGAGCATGGCATGTCCAAAAACCAGCACGGACGAAATGCTGATG    250
                     ||||||||||||.||.|||...|||||||||||.||.||||||||.||.|
BPUM_2432___o    201 TCGCGGCGAGCACGGAATGAGTAAAAACCAGCATGGCCGAAATGCGGAAG    250

BSNT_04054___    251 ATATGGTCATTAAAGTTCCGCCGGGCACCGTTGTGACAGACGATGATACG    300
                     |.|||.|..|.|||||||||||.||.||.||||||||.||.|..||.||.
BPUM_2432___o    251 AAATGATTGTCAAAGTTCCGCCCGGTACGGTTGTGACGGATGCAGAGACA    300

BSNT_04054___    301 AAACAGGTCATCGCTGATTTAACAGAGCACGGACAGCGGGCTGTCATTGC    350
                     .||||.||..|.||.||.|||||.|||||.||.||||||||.||||||||
BPUM_2432___o    301 GAACAAGTACTTGCAGACTTAACCGAGCATGGGCAGCGGGCAGTCATTGC    350

BSNT_04054___    351 AAGAGGCGGAAGAGGCGGAAGAGGAAATAGCCGCTTTGCTACACCGGCTA    400
                     ||.||||||..||||||||.||||||||...||.||.||.||||||||.|
BPUM_2432___o    351 AAAAGGCGGCCGAGGCGGACGAGGAAATTCACGTTTCGCAACACCGGCAA    400

BSNT_04054___    401 ATCCCGCGCCTCAGCTTTCAGAAAACGGCGAGCCGGGAAAAGAACGCTAC    450
                     |.||.||.||.||||||||.|||||.||||||||.||.||||||||..||
BPUM_2432___o    401 ACCCTGCACCACAGCTTTCTGAAAATGGCGAGCCAGGTAAAGAACGTGAC    450

BSNT_04054___    451 ATTGT--TCTT-GAATTAAAAGTGCTTGCAGATGTCGGACTTGTCGGGTT    497
                        ||  |||| |||||||||||.|||||||||||.||||||||.||.||
BPUM_2432___o    451 ---GTCATCTTAGAATTAAAAGTACTTGCAGATGTTGGACTTGTAGGTTT    497

BSNT_04054___    498 CCCGAGTGTGGGAAAATCTACTTTGCTGTCTGTTGTCTCATCTGCAAAAC    547
                     |||.|||||.||.||.||.||..||||.||..|||||||.|||||.||||
BPUM_2432___o    498 CCCAAGTGTCGGGAAGTCGACGCTGCTATCCATTGTCTCTTCTGCGAAAC    547

BSNT_04054___    548 CGAAAATTGCGGACTATCACTTTACAACGCTTGTCCCAAATCTCGGCATG    597
                     |||||||||||||.|||||.||||||||||||||.||.||.||.||..|.
BPUM_2432___o    548 CGAAAATTGCGGATTATCATTTTACAACGCTTGTGCCGAACCTAGGGGTT    597

BSNT_04054___    598 GTTGAAACGGATGACGGACGCAGCTTTGTCATGGCCGATTTGCCGGGGCT    647
                     ||.|||||.|||||....||.|||||.||||||||.|||.||||.||.||
BPUM_2432___o    598 GTCGAAACAGATGATAACCGAAGCTTCGTCATGGCGGATCTGCCAGGACT    647

BSNT_04054___    648 GATTGAAGGCGCACACCAAGGCGTCGGACTT-GGCCACCAGTTTTTGCGC    696
                     |||.||||||||.||..|||||||.|| ||| ||.||.||.|||||.||.
BPUM_2432___o    648 GATCGAAGGCGCGCATGAAGGCGTTGG-CTTAGGTCATCAATTTTTACGT    696

BSNT_04054___    697 CATATTGAACGGACGAGGGTTATTGTTCATGTCATTGACATGTCAG-GCT    745
                     ||.|||||.|||||..|.||.|||||||||||||||||.||||||| .||
BPUM_2432___o    697 CACATTGAGCGGACACGTGTCATTGTTCATGTCATTGATATGTCAGCACT    746

BSNT_04054___    746 TAGAAGGCCGTGATCCATATGATGATTATCTTACGATTAACCAGGAGC-T    794
                     | |||||.|||||.||.||.||.||||||.|.||.||||||.|.|||| |
BPUM_2432___o    747 T-GAAGGACGTGACCCGTACGAAGATTATGTGACCATTAACGAAGAGCTT    795

BSNT_04054___    795 GAGCGAGTACAATCTGCGTCTCACTGAGCGTCCGCAAATTATCGTTGCAA    844
                     |||| |.||||||.||.|..|.|||||||||||.|||||.||.||.||.|
BPUM_2432___o    796 GAGC-AATACAATATGAGATTGACTGAGCGTCCACAAATCATTGTAGCGA    844

BSNT_04054___    845 ATAAAATGGACATGCCGGAGGCTGCGGAAAATCTCGAAGCCTTTAAAGAA    894
                     |.||||||||||||||.||.||.||.||.|||||.|..||.|||||||||
BPUM_2432___o    845 ACAAAATGGACATGCCAGATGCAGCTGACAATCTAGCGGCATTTAAAGAA    894

BSNT_04054___    895 AAGCTGACGGATGATTATCCGGTATTCCCGATCAGTGCGGTGACAAGAGA    944
                     ||..|.||||||||||||...||.|||||.||.||||||.|.||||||||
BPUM_2432___o    895 AAATTAACGGATGATTATAAAGTGTTCCCTATTAGTGCGATCACAAGAGA    944

BSNT_04054___    945 AGGTCTGCGTGAGCTTCTGTTTGAGGTTGCCAATCAGCTTGAGAAC-ACA    993
                     |||.||.|||||||||.|.|||||..|.|||||||||||||| ||| ||.
BPUM_2432___o    945 AGGGCTTCGTGAGCTTTTATTTGAAATCGCCAATCAGCTTGA-AACAACT    993

BSNT_04054___    994 CCGGAATTCCCGCTGTATGACGAGGAAGAGCTTACACAAAACCGTGTCAT   1043
                     ||.|||||||||||.|||.|.||.||.||.||..|..|.|||||.||.||
BPUM_2432___o    994 CCCGAATTCCCGCTTTATAATGAAGAGGAACTGTCTGATAACCGCGTGAT   1043

BSNT_04054___   1044 GTACACGATGGAAAATGAAGAAGTGCCATTTAACATTACACGCGATCCAG   1093
                     |||||.|.|.||..|.|.|||.|..||||||.|.||.|||.|.|||||.|
BPUM_2432___o   1044 GTACAGGTTTGATGAGGGAGATGCACCATTTGAGATCACAAGAGATCCTG   1093

BSNT_04054___   1094 ACGGTGTATTTGTGCTTTCAGGAGACAGC-CTTGAGCGGTTATTCAAGAT   1142
                     |||||..|||||| |.||..||..|.||| ||||||||..|.||.|||||
BPUM_2432___o   1094 ACGGTACATTTGT-CATTACGGGTAAAGCACTTGAGCGACTGTTTAAGAT   1142

BSNT_04054___   1143 GACTGATTTCTCACGTGATGAATCGGTTAAACGGTTTGCAAGACAGATGC   1192
                     |||.|||||||||.|.|||||.||.||.|||||.||..|.|||||..|||
BPUM_2432___o   1143 GACAGATTTCTCAAGAGATGAGTCCGTGAAACGATTCTCTAGACAATTGC   1192

BSNT_04054___   1193 GCGGAATGGGTGTTGATGAAGCACTCAGAGAACGCGGAGC-CAAGGATGG   1241
                     |||||||||||||.|||||.||..|..|.||.||.||.|| ||| |||||
BPUM_2432___o   1193 GCGGAATGGGTGTCGATGATGCCTTGCGTGAGCGTGGTGCACAA-GATGG   1241

BSNT_04054___   1242 AGATATAATCAGGCTTCTGGAATTTGAATTTGAATTTATTGATTAA   1287
                     .||.||.||..|.||.||.|||||||||||||||||||||||||.|
BPUM_2432___o   1242 CGACATCATTCGTCTGCTTGAATTTGAATTTGAATTTATTGATTGA   1287


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.