Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04094 and BPUM_2458
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:36
# Commandline: needle
# -asequence dna-align/BSNT_04094___hemA.1.24716.seq
# -bsequence dna-align/BPUM_2458___hemA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04094___hemA-BPUM_2458___hemA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04094___hemA-BPUM_2458___hemA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04094___hemA
# 2: BPUM_2458___hemA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1425
# Identity: 994/1425 (69.8%)
# Similarity: 994/1425 (69.8%)
# Gaps: 114/1425 ( 8.0%)
# Score: 3331.5
#
#
#=======================================
BSNT_04094___ 1 ATGCATATACTTGTTGTGGGAGTAGATTATAAATCCGCCCCTATTGAGAT 50
||||||||.|||||||||||..|||||||||||.|.||||||.|||||||
BPUM_2458___h 1 ATGCATATTCTTGTTGTGGGTTTAGATTATAAAACAGCCCCTGTTGAGAT 50
BSNT_04094___ 51 ACGTGAAAAAGTAAGTTTTCAGCCGAATGAGCTGGCGGA--AGCAATGGT 98
|||.|||.|..|.||.|||.|.||||..||||| |||| |||.|| ||
BPUM_2458___h 51 ACGGGAACAGCTGAGCTTTGAACCGAGCGAGCT--CGGAACAGCGAT-GT 97
BSNT_04094___ 99 GC-AGCTGAAAGAAGAGAAAAGCATTCTTGAAAACATCATTGTCTCAACC 147
.| ||||.||||||||.|||||||||||.||.||.|||.|..|||||||.
BPUM_2458___h 98 CCAAGCTTAAAGAAGAAAAAAGCATTCTAGAGAATATCGTCATCTCAACA 147
BSNT_04094___ 148 TGCAACCGCACTGAAATTTATGCGGTAGTCGACCAGCTCCATACCGGCCG 197
||.||.||.||.||.||.||.||.||.||.||.|||||.|||||.||.||
BPUM_2458___h 148 TGTAATCGAACAGAGATCTACGCAGTGGTAGATCAGCTTCATACTGGACG 197
BSNT_04094___ 198 TTATTATATAAAAAAGTTTTTAGCTGATTGGTTTCAATTAAGCAAA-GAA 246
.|.|||||||||||..||||||||||||||| |||..||..|.||| |||
BPUM_2458___h 198 GTTTTATATAAAAAGATTTTTAGCTGATTGG-TTCGGTTTGGAAAAGGAA 246
BSNT_04094___ 247 GAGCTGTCACCGTTCTTAACGTTTTATGAGAGCGATGCCGCTGTTGAGCA 296
||..|.||.||.|..||.|.|||.|||||.|..||||..||.||.|||||
BPUM_2458___h 247 GATGTCTCGCCATATTTGAAGTTCTATGAAAATGATGGAGCGGTCGAGCA 296
BSNT_04094___ 297 TTTATTCCGTGTAGCCTGCGGACTTGACTCTATGGTGATTGGCGAAACGC 346
||||||||||||.|||||.||||||||.||.|||||||||||||||||.|
BPUM_2458___h 297 TTTATTCCGTGTGGCCTGTGGACTTGATTCCATGGTGATTGGCGAAACAC 346
BSNT_04094___ 347 AGATTCTCGGACAGGTACGCGACAGCTTTAAAACAGCTCAGCAAGAAAAA 396
|.||.||.||.||.||.|||...|||||||||..||||||..|.||.||.
BPUM_2458___h 347 AAATACTTGGTCAAGTGCGCTCTAGCTTTAAAGTAGCTCAAGAGGAGAAG 396
BSNT_04094___ 397 ACGATCGGGACTATTTTTAATGAGCTGTTTAAGCAGGCGGTTACAGTGGG 446
||.||.||.||..||||.|||.|..|||||||.||||||||.||.||.|.
BPUM_2458___h 397 ACCATTGGTACCGTTTTCAATTATTTGTTTAAACAGGCGGTCACCGTTGC 446
BSNT_04094___ 447 CAAACGGACTCACGCAGAAACAGACATTGGCTCAAATGCGGTGTCAGTAA 496
.|||||..||||.||.|||||||||||||..||.|||||.|||||.||.|
BPUM_2458___h 447 AAAACGCTCTCATGCGGAAACAGACATTGCGTCTAATGCTGTGTCTGTCA 496
BSNT_04094___ 497 GCTATGCTGCAGTTGAACTTGCCAAAAAAATCTTCGGAAATCTTTC---- 542
|||||||.||.||.||.|||||||||||||||||.|||..||||||
BPUM_2458___h 497 GCTATGCAGCTGTCGAGCTTGCCAAAAAAATCTTTGGACGTCTTTCTGAT 546
BSNT_04094___ 543 AAGCAAGCACATAT--TGATTCTCGGTGCGGGAAAAATGGGCGAGCTTGC 590
|| ||||.| |||||||.||||||||.|||||||||||.||.||
BPUM_2458___h 547 AA------ACATGTCCTGATTCTTGGTGCGGGTAAAATGGGCGAACTAGC 590
BSNT_04094___ 591 TGCGGAAAACCTGCACGGACAGGGAATCGG-CAAGGTCACTGTCATTAAC 639
.||..|||||||.||.||.||.|||||.|| ||| ||.||.||.||.||.
BPUM_2458___h 591 GGCTCAAAACCTTCAAGGTCAAGGAATTGGTCAA-GTAACGGTTATCAAT 639
BSNT_04094___ 640 CGAACGTACTTGAAAGCGAAGGAGCTTGCAGACCGTTTCTCAGGTGAAGC 689
||||||||...||||||.||.||..|.||.|..|||||.|||||.||..|
BPUM_2458___h 640 CGAACGTATGAGAAAGCAAAAGAATTGGCGGGTCGTTTTTCAGGAGAGCC 689
BSNT_04094___ 690 GAGAAGCTTGAATCAGCTTGAAAGCGCGCTTGCGGAGGCTGATATTTTAA 739
.|.||||||.||.||..|.||||...|..|..|.||.||.||.|||||||
BPUM_2458___h 690 TAAAAGCTTAAACCAATTGGAAAAAACATTATCCGAAGCGGACATTTTAA 739
BSNT_04094___ 740 TCAGTTCAACCGGTGCAAGTGAATTTGTCGTGTCCAAAGAGATGATGGAA 789
|.||.||.||.|||||.|...||||||||.|..|.|||||.|||.|.|||
BPUM_2458___h 740 TTAGCTCCACTGGTGCGAAACAATTTGTCATTACAAAAGAAATGGTTGAA 789
BSNT_04094___ 790 AACGCGAATAAGCTTCGCAAGGGACGTCCGCTGTTTATGGTCGACATTGC 839
|..||||||||....||.|||||..|.||.||.||||||||.||.|||||
BPUM_2458___h 790 AGTGCGAATAAAAAGCGGAAGGGCAGACCACTATTTATGGTGGATATTGC 839
BSNT_04094___ 840 CGTGCCTAGAGATCTTGATCCGGC----GCTGAATGATCTTGAAGGTGTT 885
.|||||..|.|||||.|||||.|| .||||| .|.|||||||.|
BPUM_2458___h 840 TGTGCCACGTGATCTAGATCCAGCCATTTCTGAA----GTAGAAGGTGCT 885
BSNT_04094___ 886 TTTCTTTATGATATCGACGATCTGGAAGGCATTGTAGAAGCGAACATGAA 935
|||.|.|||||.||.||.||.||.||.|||||.||.|.|||||||.|.||
BPUM_2458___h 886 TTTTTGTATGACATTGATGACCTTGAGGGCATCGTGGCAGCGAACTTAAA 935
BSNT_04094___ 936 AGA-------GCGGAGAGAAACAGCTGAAAAAGTTGAACTGTTAATTGAA 978
||| ||||.| |||||..|.|||||.||..|.||||||
BPUM_2458___h 936 AGAACGCCGTGCGGTG-------GCTGAGCAGGTTGAGCTTCTCATTGAA 978
BSNT_04094___ 979 GAAACCATTGTGGAATTTAAACAATGGATGAATACACTTGGTGTTGTGCC 1028
|.|...||||||||||||||.||||||.|||||||.||||||||.||.||
BPUM_2458___h 979 GCAGAAATTGTGGAATTTAAGCAATGGCTGAATACGCTTGGTGTGGTTCC 1028
BSNT_04094___ 1029 GGTTATTTCTGCATTGCGCGAAAAGGCGCTTGCCATCCAGTCAGAAACGA 1078
.||.|||||||||.|..|.|||||.|||||..|.||.||..||||.||||
BPUM_2458___h 1029 TGTCATTTCTGCACTTAGAGAAAAAGCGCTGACGATTCAAGCAGATACGA 1078
BSNT_04094___ 1079 TGGACAGCATTGAGCGTAAGCTGCCTCA-CTTAAGCACA-AGAGAGAAA- 1125
||.|.||.||||||||.|||||.||..| || |||| |..|.||||
BPUM_2458___h 1079 TGCAGAGTATTGAGCGAAAGCTTCCGAATCT----CACACACCGTGAAAT 1124
BSNT_04094___ 1126 -AAACTGTTGAACAAACACACCAAAAGTATTATTAACCAAATGCTTCGTG 1174
||.||.||.||.|||||.||.|||||.|||||.||.||||||||....|
BPUM_2458___h 1125 GAAGCTATTAAATAAACATACGAAAAGCATTATCAATCAAATGCTGAAAG 1174
BSNT_04094___ 1175 ATCCGATTTTAAAGGTGAAAGAGCTTGCGGCAGATGCTG-ATTCTGAAGA 1223
||||.||.|||||||..|||||..||||.||.|| ||.| ||.|.||.||
BPUM_2458___h 1175 ATCCTATCTTAAAGGCAAAAGAAATTGCCGCGGA-GCCGAATGCAGAGGA 1223
BSNT_04094___ 1224 AAAGCTCGCGT----TGTTTATGCAGATTTTTGAT------ATTGAAGAA 1263
|||.|| | |.||||...|.||.|||||| .|||||||.
BPUM_2458___h 1224 AAAACT----TTTACTCTTTAAAGAAATCTTTGATTTACAGGTTGAAGAT 1269
BSNT_04094___ 1264 GCTGCGGGCCGTCAAATGATGAAAA-------CCGTTGAA--AGCAGCCA 1304
| |.||..|||| |||.||.| .|.|||.|
BPUM_2458___h 1270 G--------------AAGAGCAAAAGGTCGAGCCGGTGCAGGTGGAGCAA 1305
BSNT_04094___ 1305 GAAGGTCCACTCTTTTAAGAAGGCTG----AATCAAA------AGCGGGC 1344
|.| ||.|||.| |||| ||.|||| |...|||
BPUM_2458___h 1306 GGA-------TCATTTCA----GCTGTTCAAACCAAATATGGCACAAGGC 1344
BSNT_04094___ 1345 TTTAGC-CCACTTGTAAGTGAGTGA 1368
||| || .||.|||..|||||||||
BPUM_2458___h 1345 TTT-GCTACAGTTGCCAGTGAGTGA 1368
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