Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04170 and BPUM_2515

See Amino acid alignment / Visit BSNT_04170 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence dna-align/BSNT_04170___yshE.1.24716.seq
#    -bsequence dna-align/BPUM_2515___yshE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04170___yshE-BPUM_2515___yshE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04170___yshE-BPUM_2515___yshE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04170___yshE
# 2: BPUM_2515___yshE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity:     314/407 (77.1%)
# Similarity:   314/407 (77.1%)
# Gaps:           4/407 ( 1.0%)
# Score: 1174.0
# 
#
#=======================================

BSNT_04170___      1 ATGAGTGATTTTTGGGAAAACGAGCTTGTGGAAATCGCGGCATATTACAG     50
                     ||||..|..|||||||||||.||.|||||||||||.||.||.|||||.||
BPUM_2515___y      1 ATGAAAGCCTTTTGGGAAAATGAACTTGTGGAAATTGCCGCCTATTATAG     50

BSNT_04170___     51 TGTCGCGGTTCTCTGCCTCGTCCTCTTTTTGACTGTGTTTGAGCTGGTGA    100
                     .||.||.||.|||||.||||||.|.|||.|.||..|.|||||.||.||.|
BPUM_2515___y     51 CGTGGCCGTCCTCTGTCTCGTCTTATTTCTAACCATTTTTGAACTCGTCA    100

BSNT_04170___    101 CGGCTTATAAAAACTGGGAAGAGATTCAAAAAGGAAATCTT-GCGGTGGC    149
                     |..||||||||||||||||||||||.||....||.|| ||| ||.||.||
BPUM_2515___y    101 CCTCTTATAAAAACTGGGAAGAGATCCAGCGTGGCAA-CTTAGCTGTTGC    149

BSNT_04170___    150 AATGGCGACCGGCGGAAAAAT-TTTGGGAATCGCAAACGTATTTCAGCAT    198
                     .|||||.||.|||||.||.|| |||||| ||.||.||.||.|||||||||
BPUM_2515___y    150 CATGGCAACAGGCGGGAAGATCTTTGGG-ATTGCGAATGTGTTTCAGCAT    198

BSNT_04170___    199 TCCATCTCCCAGCATAATTCGCTGCTGCAAATGATCGGCTGGGGCGTTTA    248
                     ||.|||.|.|||||.|||||.||.||.||||||.|.||.||||||||.||
BPUM_2515___y    199 TCAATCGCACAGCACAATTCCCTTCTTCAAATGGTTGGATGGGGCGTATA    248

BSNT_04170___    249 CGGGTTTGTTATGCTTCTGATCAGCTACTTTATTTTTGAGTTTTTGACTC    298
                     |||.|||||.|||||.||..|||||||.||.||||||||.|||||.||.|
BPUM_2515___y    249 CGGCTTTGTGATGCTGCTCGTCAGCTATTTCATTTTTGAATTTTTAACAC    298

BSNT_04170___    299 CGCGGTTTAAAATTGATCAGGAAATCGAAAATGATAACCGGGCTGTCGGC    348
                     ||||.||||||.|.||..|.||.||.|||||||||||..|.||.|||||.
BPUM_2515___y    299 CGCGTTTTAAAGTAGACAAAGAGATTGAAAATGATAATAGAGCGGTCGGG    348

BSNT_04170___    349 TTTATTTCATTTGTCATTTCTGTCGGGCTTTCATTTGTGGTGGCAGCCGG    398
                     |||||||||.||.|||||||.||.|||||.||.|.|||.||.||||||||
BPUM_2515___y    349 TTTATTTCACTTATCATTTCAGTTGGGCTGTCTTATGTAGTAGCAGCCGG    398

BSNT_04170___    399 AATATAA    405
                     .||.|||
BPUM_2515___y    399 CATTTAA    405


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