Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04183 and BPUM_2524

See Amino acid alignment / Visit BSNT_04183 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence dna-align/BSNT_04183___sspI.1.24716.seq
#    -bsequence dna-align/BPUM_2524___sspI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04183___sspI-BPUM_2524___sspI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04183___sspI-BPUM_2524___sspI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04183___sspI
# 2: BPUM_2524___sspI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity:     164/225 (72.9%)
# Similarity:   164/225 (72.9%)
# Gaps:          12/225 ( 5.3%)
# Score: 580.0
# 
#
#=======================================

BSNT_04183___      1 ATGGATCTTAATTTACGTCATGCCGTCATTGCCAATGTCACCGGCAATAA     50
                     ||||||.||||||||.|....||.||||||...||..|.||.|||.||||
BPUM_2524___s      1 ATGGATTTTAATTTAAGAGGCGCAGTCATTCAAAACATTACTGGCCATAA     50

BSNT_04183___     51 TCAGGAGCAGCTTGAGCATACAATCGTAGATGCGATTCAAAGCGGTGAAG    100
                     |||.||.||||||||||||||.||..|||||||.||||||||||||||.|
BPUM_2524___s     51 TCAAGAACAGCTTGAGCATACGATTTTAGATGCCATTCAAAGCGGTGAGG    100

BSNT_04183___    101 AAAAAATGCTTCCAGGGCTCGGCGTTTTATTCGAAGTCATTTGGCAGCAC    150
                     ||||||||.|.|||||.||.|||||.||.||.|||||..|.|||||..|.
BPUM_2524___s    101 AAAAAATGTTGCCAGGCCTTGGCGTGTTGTTTGAAGTGCTATGGCAAGAA    150

BSNT_04183___    151 GCATCCGAAAGTGAGAAAAACGAAATGCTGAAAACGCTTG---AAGGCGG    197
                     |||||.||||..|||||.|||||.||.||..||||..|.|   |||||  
BPUM_2524___s    151 GCATCAGAAAACGAGAAGAACGAGATTCTTGAAACATTAGAGCAAGGC--    198

BSNT_04183___    198 ATTAAA-----ACCCGCCG-AATAA    216
                      |||||     |.|.||.| |||||
BPUM_2524___s    199 -TTAAAGCCTCATCAGCAGCAATAA    222


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