Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04264 and BPUM_2562

See Amino acid alignment / Visit BSNT_04264 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence dna-align/BSNT_04264___pfkA.1.24716.seq
#    -bsequence dna-align/BPUM_2562___pfkA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04264___pfkA-BPUM_2562___pfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04264___pfkA-BPUM_2562___pfkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04264___pfkA
# 2: BPUM_2562___pfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 961
# Identity:     785/961 (81.7%)
# Similarity:   785/961 (81.7%)
# Gaps:           2/961 ( 0.2%)
# Score: 3209.0
# 
#
#=======================================

BSNT_04264___      1 ATGAAACGTATAGGGGTATTAACGAGCGGCGGGGATTCCCCGGGAATGAA     50
                     |||||.||||||||.||.|||||||||||.|||||||||||.||||||||
BPUM_2562___p      1 ATGAAGCGTATAGGAGTTTTAACGAGCGGTGGGGATTCCCCAGGAATGAA     50

BSNT_04264___     51 CGCAGCAGTTCGCGCAGTAGTCAGAAAAGCGATCTATCATGACGTTGAAG    100
                     .|||||.||.||||||||.||.||.|||||.||.||.|||.|.|||||||
BPUM_2562___p     51 TGCAGCTGTGCGCGCAGTTGTAAGGAAAGCAATTTACCATAATGTTGAAG    100

BSNT_04264___    101 TTTACGGTATTTACAACGGATACGCGGGATTGATCAGCGGAAAGATTGAA    150
                     |||||||||||||.||.|||||..|.||..|.||.|.|||.||.|||||.
BPUM_2562___p    101 TTTACGGTATTTATAATGGATATTCAGGTCTAATTAACGGTAAAATTGAG    150

BSNT_04264___    151 AAGCTTGAACTCGGATCAGTAGGCGATATTATACATCGTGGAGGAACTAA    200
                     ||.||||||.|.||.|||||.||||||||.||.||||||||||||||.||
BPUM_2562___p    151 AAACTTGAAATAGGTTCAGTTGGCGATATCATTCATCGTGGAGGAACAAA    200

BSNT_04264___    201 GCTTTATACGGCAAGATGTCCTGAATTCAAAACAGTTGAAGGCCGTGAAA    250
                     .|||||.|||||||||||.|||||||||||.|||||||||||.|||||||
BPUM_2562___p    201 ACTTTACACGGCAAGATGCCCTGAATTCAAGACAGTTGAAGGTCGTGAAA    250

BSNT_04264___    251 AAGGGATAGAAAACTTGAAGAAGCTTGGTATTGAAGGCCTTGTTGTTATC    300
                     ||||.||.||.|||||.||.||..|.|||||||||||.||||||||.|||
BPUM_2562___p    251 AAGGCATTGAGAACTTAAAAAAATTCGGTATTGAAGGACTTGTTGTGATC    300

BSNT_04264___    301 GGCGGAGACGGTTCATATATGGGTGCGAAAAAATTAACGGAACACGGGTT    350
                     ||||||||||||||||..|||||.|||||.|||||||||||.|.|||.||
BPUM_2562___p    301 GGCGGAGACGGTTCATTCATGGGAGCGAAGAAATTAACGGAGCTCGGTTT    350

BSNT_04264___    351 TCCATGTGTAGGTGTACCGGGTACAATTGATAATGACATTCCGGGCACTG    400
                     |||||||||||||||.||.||||||||.||.||.||.||.||.||.||||
BPUM_2562___p    351 TCCATGTGTAGGTGTCCCAGGTACAATCGACAACGATATCCCAGGTACTG    400

BSNT_04264___    401 ATTTTACAATCGGTTTCGATACAGCTTTAAATACAGTAATTGACGCAATT    450
                     ||||.||.||.||.||.||||||||..|.||||||||.||||||||.|||
BPUM_2562___p    401 ATTTCACTATTGGCTTTGATACAGCACTGAATACAGTCATTGACGCCATT    450

BSNT_04264___    451 GATAAGATTCGCGATACAGCGACTTCTCATGAACGTACATATGTAATCGA    500
                     |||||.|||||.||||||||.||.|||||||||||||||||.|||.|.||
BPUM_2562___p    451 GATAAAATTCGTGATACAGCCACATCTCATGAACGTACATACGTAGTGGA    500

BSNT_04264___    501 AGTAATGGGCCGTCATGCCGGCGATATCGCATTGTGGGCCGGTCTTGCAG    550
                     |||||||||..|.|||||.||.|||||.||..|.|||.|.||||||||||
BPUM_2562___p    501 AGTAATGGGAAGACATGCTGGTGATATTGCTCTTTGGTCAGGTCTTGCAG    550

BSNT_04264___    551 GGGGCGCGGAATCGATCTTAATCCCTGAGGCAGACTATGACATGCACGAA    600
                     |.||.||.||||||||.||.||.|||||.|||||||||||||||.|.|||
BPUM_2562___p    551 GCGGAGCCGAATCGATTTTGATTCCTGAAGCAGACTATGACATGGATGAA    600

BSNT_04264___    601 ATCATTGCCCGCTTAAAACGCGGCCACGAACGCGGCAAGAAGCACAGTAT    650
                     ||.|||||..|.||||.|.|.||.|||||.||||||||||||||||||||
BPUM_2562___p    601 ATTATTGCGAGATTAAGAAGAGGGCACGAGCGCGGCAAGAAGCACAGTAT    650

BSNT_04264___    651 TATTATTGTTGCCGAAGGTGTAGGCAGCGGTGTTGAATTCGGGAAACGCA    700
                     .||.||.||.||.|||||.||||||||||||||||||||.||.||.||.|
BPUM_2562___p    651 CATCATCGTCGCAGAAGGCGTAGGCAGCGGTGTTGAATTTGGTAAGCGGA    700

BSNT_04264___    701 TTGAAGAAGAAACAAATCTTGAAACTAGGGTATCTGTATTGGGCCATATC    750
                     |||||||.||.||||..||||||||..|.||||||||.||.||.|||||.
BPUM_2562___p    701 TTGAAGAGGAGACAAGCCTTGAAACCCGTGTATCTGTCTTAGGACATATT    750

BSNT_04264___    751 CAGCGCGGAGGTTCTCCGAGTGCTGCTGACCGTGTGTTAGCAAGCCGTCT    800
                     |||||||||||||||||.|||||...||||||.||..|.|||||||||.|
BPUM_2562___p    751 CAGCGCGGAGGTTCTCCAAGTGCGTTTGACCGAGTACTCGCAAGCCGTTT    800

BSNT_04264___    801 CGGCGCATATGCAGTTGAACTGCTGCTTGAAGGAAAAGGCGGACGCTGTG    850
                     .||.|||||.|||||.|||||.||.|||||||||||||||||||||||||
BPUM_2562___p    801 AGGAGCATACGCAGTAGAACTTCTTCTTGAAGGAAAAGGCGGACGCTGTG    850

BSNT_04264___    851 TAGGTATACAAAACAATAAGCTTGTAGACCATGATATTATAGAAATACTT    900
                     |||||||.||||.|||..|.||.||..||||.||||||.||||.|| |||
BPUM_2562___p    851 TAGGTATTCAAAGCAACGAACTCGTTCACCACGATATTTTAGATAT-CTT    899

BSNT_04264___    901 -GAGACAAAACACACAGTTGAGCAAAACATGTATCAGCTTTCAAAAGAAC    949
                      ||.|.||||||.|||||.||.|||||.|||||.|..||||||.||||.|
BPUM_2562___p    900 AGATAAAAAACATACAGTCGATCAAAATATGTACCGACTTTCACAAGAGC    949

BSNT_04264___    950 TGTCTATCTAA    960
                     |.|||||.|||
BPUM_2562___p    950 TCTCTATATAA    960


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