Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04270 and BPUM_2567
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_04270.1.24716.seq
# -bsequence dna-align/BPUM_2567___ytrH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04270-BPUM_2567___ytrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04270-BPUM_2567___ytrH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04270
# 2: BPUM_2567___ytrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 251/351 (71.5%)
# Similarity: 251/351 (71.5%)
# Gaps: 18/351 ( 5.1%)
# Score: 861.0
#
#
#=======================================
BSNT_04270 1 ATGGAT---CAGGAAGCAGGATTTATGGTGAATTTTATCAATAGC---TA 44
|||||| .||||||| .|||||....|||||||| |||| ||
BPUM_2567___y 1 ATGGATGTGAAGGAAGC---TTTTATACCAAATTTTAT---TAGCTGTTA 44
BSNT_04270 45 CTTCATTGCGTTAGGGGTGCTGATCGGGGGCGCACTCATCGGAGGGCTCG 94
.||.|||||..|.|||||..|..|.|||||.||..|.||.||.||..|.|
BPUM_2567___y 45 TTTTATTGCACTTGGGGTCATTTTGGGGGGTGCCATTATAGGCGGTGTTG 94
BSNT_04270 95 GAGCATATTTGGCAGGCGAACCCCCGCTTACAGCC---ATTACAAAGCTT 141
|.||.||||||||.|| .|..||||.|..|.|| |||||.|..|||
BPUM_2567___y 95 GTGCTTATTTGGCTGG---TCAGCCGCCTTTATCCATTATTACGAGTCTT 141
BSNT_04270 142 GCCAACCGGTTAAAAATATGGGCGCTTGTCGCAGCTATCGGAGGCACCTT 191
|||||.||.|||||.||.||||||||.||||||||||||||.||.||.||
BPUM_2567___y 142 GCCAATCGTTTAAAGATTTGGGCGCTGGTCGCAGCTATCGGCGGAACGTT 191
BSNT_04270 192 TGATGCGGTATACAGCTTTGAACGCGGCATACTCGAAGGCAATACGAGAG 241
||||||.||.||.|||||||||.|.|||||..|.|||||.||.|||.|.|
BPUM_2567___y 192 TGATGCTGTTTATAGCTTTGAAAGAGGCATTTTTGAAGGGAACACGCGTG 241
BSNT_04270 242 ATATCTTTAAACAGCTTCTTTTAATTATTTCGGCCATGGGGGGCGCGCAA 291
||||.||.||.|||.||.|.||||||.|.||.||||||||.||.||||||
BPUM_2567___y 242 ATATTTTCAAGCAGATTTTATTAATTGTCTCTGCCATGGGCGGTGCGCAA 291
BSNT_04270 292 AGCGGCTGGCTTATTATATCATGGCTGACCCAGGAGCATCTTTCTTCATG 341
|..||.|..||.|||||..|.|||||.||||||||||||.|.||.|||||
BPUM_2567___y 292 ACGGGTTATCTCATTATCACGTGGCTCACCCAGGAGCATGTGTCATCATG 341
BSNT_04270 342 A 342
|
BPUM_2567___y 342 A 342
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