Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04275 and BPUM_2571
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_04275___ytpI.1.24716.seq
# -bsequence dna-align/BPUM_2571___ytpI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04275___ytpI-BPUM_2571___ytpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04275___ytpI-BPUM_2571___ytpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04275___ytpI
# 2: BPUM_2571___ytpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 206/338 (60.9%)
# Similarity: 206/338 (60.9%)
# Gaps: 70/338 (20.7%)
# Score: 547.5
#
#
#=======================================
BSNT_04275___ 1 ATGCTGGTT---CTTGTTTTTTTGATTGGGCTTTCCGCC-TGCTTTTATG 46
|||||.||| .||||.|||.|.|||.| |||.||| || ||||||.
BPUM_2571___y 1 ATGCTTGTTTTGATTGTGTTTATTATTTG---TTCTGCCATG-TTTTATT 46
BSNT_04275___ 47 TGTACTATAAAGTAAAA----GGCGTACGGGCAAA--GCCATCTTTGGCA 90
|.|||||.||||.|||| ..|||||| || ||| |..|.| |
BPUM_2571___y 47 TATACTACAAAGCAAAAAATGTCCGTACG----AACCGCC--CAGTCG-A 89
BSNT_04275___ 91 AAAGAAA-TATGTTCAGCAAAATCAAGCATGGC-CTTAGGGTCACTAGTC 138
.|||||| |.||.||.||.|||||.||.||||| ||| ||.|...|.|||
BPUM_2571___y 90 GAAGAAATTTTGGTCGGCGAAATCCAGTATGGCACTT-GGCTGCTTTGTC 138
BSNT_04275___ 139 CTGTTCTACGGGCTCAACCAAATGATATTATT------CCATTCAGT-AT 181
|||.|||.|||..|.||.|| |||||| ||..|| || |.
BPUM_2571___y 139 CTGCTCTTCGGTGTGAATCA------ATTATTTCTAAACCGCTC-GTCAC 181
BSNT_04275___ 182 TAACGTTAGTAATCGGCGGTATCTT------------TATCGTCATAGGA 219
|..|.||.||.||.||...|||.|| |||||
BPUM_2571___y 182 TCGCATTTGTCATTGGATTTATTTTTGTTGCTGTTGGTATCG-------- 223
BSNT_04275___ 220 GCAGGAAGCGCTTGGGCAGGTTATAAAGCCTTCAGGCATTACAATCCCC- 268
||||.| |.|||||.||.||||||||||.||.|||||||..|||.|
BPUM_2571___y 224 GCAGTA----CGTGGGCTGGATATAAAGCCTACAAGCATTACCTTCCGCT 269
BSNT_04275___ 269 ---TTCACGCCAAAGAAGCTGAAAGAGATCACGCGTAA 303
||.| ||.||||..||||.|||||||||.|||
BPUM_2571___y 270 CTTTTTA----AAGGAAGGCGAAAAAGATCACGCATAA 303
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