Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04316 and BPUM_2609
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_04316.1.24716.seq
# -bsequence dna-align/BPUM_2609___ytsP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04316-BPUM_2609___ytsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04316-BPUM_2609___ytsP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04316
# 2: BPUM_2609___ytsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 357/507 (70.4%)
# Similarity: 357/507 (70.4%)
# Gaps: 24/507 ( 4.7%)
# Score: 1202.5
#
#
#=======================================
BSNT_04316 1 ATGTTCCATGTCGAAAAACAATCTGGAGATAAAGAAAAAGACTATCAGCT 50
|||||.||||||||||||||..||||.|||..|..||||||||||||..|
BPUM_2609___y 1 ATGTTTCATGTCGAAAAACAGGCTGGCGATCCATCAAAAGACTATCAATT 50
BSNT_04316 51 TCTGCTAAAACAGCTCGAAGCCATGACCGAAGACGAAACAGACCAAATAG 100
.||..|.||||||.||||||||||.||.||.|..||..|.||.|.|||.|
BPUM_2609___y 51 GCTCGTTAAACAGGTCGAAGCCATTACAGATGGTGAGCCTGATCTAATTG 100
BSNT_04316 101 CTAA-CTATGCAAATGCCTCAGCACTGCTGTATCATTCGCTGCCTGAAGT 149
|||| ||| ||||||||..|.||.||..||||.|||||.||.||.||.||
BPUM_2609___y 101 CTAACCTA-GCAAATGCGGCGGCGCTATTGTACCATTCACTCCCAGAGGT 149
BSNT_04316 150 CAACTGGGCGGGTTTCTATTTTGCCAAAGAAGAG-GATGGACAGCTTGTG 198
|||.|||||.||.||.|||||.||.|||| | |||| ||||||||
BPUM_2609___y 150 CAATTGGGCAGGATTTTATTTGGCTAAAG----GCGATG---AGCTTGTG 192
BSNT_04316 199 TTAGGTCCGTTCCAAGGCCTCCCGGCATGTGTTCGGATTCCTTTCGGCAG 248
.|.||.|||||..|.||.||.||.||.|||||.||.||.||.|..||.|.
BPUM_2609___y 193 CTCGGACCGTTTAACGGACTTCCTGCTTGTGTGCGTATCCCATCTGGGAA 242
BSNT_04316 249 AGGGGTTTGCGGCACAGCGTACGCAAACGGAAAAGTGGAACGTGTTGAGG 298
|||.||||||||.||.||||..||||..||..||||..|.|||.|.|..|
BPUM_2609___y 243 AGGCGTTTGCGGTACTGCGTTTGCAACAGGTGAAGTCCAGCGTATCGCTG 292
BSNT_04316 299 ATGTAAACGCGTTTCCTGGACATATCGCCTGCGATGCAGCGTCCCAATCA 348
||||..||||.||.||||||||||||||.||.||||||||.||.|||||.
BPUM_2609___y 293 ATGTGCACGCATTCCCTGGACATATCGCATGTGATGCAGCATCACAATCT 342
BSNT_04316 349 GAAATTGTGCTTCCGATTCGTGTAGACGGAAAAATTGTCGGCGTCTTGGA 398
||||||||..|||||.|....|||.|.|||.|.||..|.||.||..|.||
BPUM_2609___y 343 GAAATTGTCGTTCCGCTCAAAGTAAATGGAGAGATCATTGGGGTTCTCGA 392
BSNT_04316 399 CATCGACAGCCCAGTGAAAAACCGTTTCGACGAAATTGATGAAAAATACT 448
|||.|||||.||.||||||.||||||||...|||.|.|||||||..||||
BPUM_2609___y 393 CATTGACAGTCCTGTGAAAGACCGTTTCAGTGAAGTAGATGAAACCTACT 442
BSNT_04316 449 TAACTCAATTTGCCGAAACGCTAGAAAAAGCGTTAGC------------- 485
|||.||||||..||||....||..||||.||||||.|
BPUM_2609___y 443 TAATTCAATTGACCGAGGTACTCCAAAAGGCGTTATCCGTCTCTACAAAT 492
BSNT_04316 486 GCAGTAA 492
||| |||
BPUM_2609___y 493 GCA-TAA 498
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