Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04322 and BPUM_2615

See Amino acid alignment / Visit BSNT_04322 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_04322___tyrS.1.24716.seq
#    -bsequence dna-align/BPUM_2615___tyrS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04322___tyrS-BPUM_2615___tyrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04322___tyrS-BPUM_2615___tyrS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04322___tyrS
# 2: BPUM_2615___tyrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1286
# Identity:     991/1286 (77.1%)
# Similarity:   991/1286 (77.1%)
# Gaps:          34/1286 ( 2.6%)
# Score: 3761.0
# 
#
#=======================================

BSNT_04322___      1 ATGA--CAAACTTACTTGAAGACTTATCCTTCCGCGGATTGATTCAGCAA     48
                     ||||  |||  ||..|.|||||.|||||.||..|.|||||.|||||||||
BPUM_2615___t      1 ATGAGTCAA--TTGATGGAAGAGTTATCGTTTAGAGGATTAATTCAGCAA     48

BSNT_04322___     49 ATGACAGATGAAGAAGGGTTAAATAAA----CAGCTGAATGAAGAAAAAA     94
                     ...||||||||||||||.||||.||||    .|||    .||||||||||
BPUM_2615___t     49 CAAACAGATGAAGAAGGTTTAACTAAATTATTAGC----AGAAGAAAAAA     94

BSNT_04322___     95 TC-CGCTTGTACTCAGGCTTTGACCCGACAGCAGACAGCTTGCATATCGG    143
                     || .|||| |||||.|||||||||||||||||.||||||||.||.||.||
BPUM_2615___t     95 TCAAGCTT-TACTCCGGCTTTGACCCGACAGCGGACAGCTTACACATTGG    143

BSNT_04322___    144 ACACCTGCTGCCTATTTTAACACTTCGCCGTTTTCAGCTTGCGGGGCATC    193
                     .|||||..||||.|||||||||.|.|||.|.||.|||...||.||.||||
BPUM_2615___t    144 TCACCTATTGCCAATTTTAACATTACGCAGATTCCAGGAAGCAGGCCATC    193

BSNT_04322___    194 ATCCGATTGCGCTTGTGGGCGGCGCGACGGGCCTCATCGGTGATCCAAGC    243
                     |.||||||||.|||||.|||||.||.||.||.||.|||||.||.||.|||
BPUM_2615___t    194 ACCCGATTGCTCTTGTTGGCGGGGCAACTGGACTAATCGGCGACCCTAGC    243

BSNT_04322___    244 GGAAAAAAAGCAGAGCGTACATTAAACACTGCTGACATCGTATCCGAA--    291
                     ...|||||||||||.|||.||.|||||.|.||.||.||.||   .|||  
BPUM_2615___t    244 TTCAAAAAAGCAGAACGTTCACTAAACCCAGCAGAAATTGT---TGAACA    290

BSNT_04322___    292 -TGGTCCCAAAAAATCAAAAACCAGCTGTC-CAGATTTCTAGATTTTGAA    339
                      |||||..|.|||||||||...|||||.|| || ||||||.|||||||||
BPUM_2615___t    291 TTGGTCAGATAAAATCAAAGGACAGCTTTCTCA-ATTTCTTGATTTTGAA    339

BSNT_04322___    340 GCAGCAGAAAACCCAGCTGTCATCGCGAACAACTTTGACTGGATCGGCAA    389
                     ||||..||.||||||||.||.||||.|||.||||..|||||||||.||.|
BPUM_2615___t    340 GCAGGTGAGAACCCAGCCGTTATCGTGAATAACTACGACTGGATCAGCCA    389

BSNT_04322___    390 AATGAATGTGATCGATTTCCTTCGTGACGTTGGTAAAAATTTCGGCATCA    439
                     |||||||||||||...|||||||||||..||||.|||||.||.||..|.|
BPUM_2615___t    390 AATGAATGTGATCACGTTCCTTCGTGATATTGGAAAAAACTTTGGTGTGA    439

BSNT_04322___    440 ATTACATGCTGGCAAAAGATACGGTCAGCTCAAGAATTGAATCAGGCATC    489
                     |.|.|||||||||||||||||..||||||||..|.||||||.|||||||.
BPUM_2615___t    440 ACTTCATGCTGGCAAAAGATATCGTCAGCTCTCGGATTGAAACAGGCATT    489

BSNT_04322___    490 TCGTACACTGAATTCAGCTACATGATTCTTCAATCTTATGATTTCTTAAA    539
                     ||||||||.||.|||||||||.|.||.||.|||||||..||.||||||||
BPUM_2615___t    490 TCGTACACAGAGTTCAGCTACGTCATCCTGCAATCTTTAGACTTCTTAAA    539

BSNT_04322___    540 TCTTTACAGAGACAAAAACTGTAAACTGCAAATCGGCGGAAGCGATCAGT    589
                     ||||||||||.|..||||||||||.||||||||.||.||||||||.||||
BPUM_2615___t    540 TCTTTACAGAAATGAAAACTGTAAGCTGCAAATTGGTGGAAGCGACCAGT    589

BSNT_04322___    590 GGGGCAATATCACAGCGGGTCTTGAACTGATCAGAAAATCAGAAGAAGAA    639
                     ||||.|||||||||.|.||.|||||.||||||.|.||.||.||||.||||
BPUM_2615___t    590 GGGGAAATATCACATCTGGACTTGAGCTGATCCGTAAGTCTGAAGCAGAA    639

BSNT_04322___    640 GGAGCAAAAGCGTTCGGCCTAACGATTCCGCTTGTCACAAAAGCAGACGG    689
                     ||.||||||||.|||||..|||||||.|||||||||||.|||||||||||
BPUM_2615___t    640 GGGGCAAAAGCATTCGGTTTAACGATGCCGCTTGTCACGAAAGCAGACGG    689

BSNT_04322___    690 CACGAAGTTCGGAAAAACGGAAGGCGGCGCGATCTGGCTTGATAAAGAAA    739
                     .||||||||.||||||||.|||||||||||.||||||.|.||||||||||
BPUM_2615___t    690 TACGAAGTTTGGAAAAACAGAAGGCGGCGCCATCTGGTTAGATAAAGAAA    739

BSNT_04322___    740 AAACATCGCCATATGAATTCTATCAATTCTGGATCAACACAGACGACCGT    789
                     |||||||.||||||||.|||||.||||||||||||||||||||.||||||
BPUM_2615___t    740 AAACATCTCCATATGAGTTCTACCAATTCTGGATCAACACAGATGACCGT    789

BSNT_04322___    790 GACGTTGTCAAATACTTGAAATACTTTACGTTCCTTTCAAAAGAGGAAAT    839
                     |||||.||.||||||||.|||||||||||||||.|.||.|||||.||.||
BPUM_2615___t    790 GACGTCGTGAAATACTTAAAATACTTTACGTTCTTATCGAAAGAAGAGAT    839

BSNT_04322___    840 TGAAGCATACGCTGAAAAAACAGAAACGGCGCCAGAAAAACGTGAAGCGC    889
                     .|.|.|.||||..||||||....||||.||.||.||||||||||||||.|
BPUM_2615___t    840 CGCATCGTACGAAGAAAAAGTGCAAACAGCACCTGAAAAACGTGAAGCAC    889

BSNT_04322___    890 AAAAACGCCTGGCAGAAGAAGTGACATCACTTGTTCACGGACGCGAGGCG    939
                     |....||.||.|||||.|||||.||..||||.||.||.||.||.||..|.
BPUM_2615___t    890 AGCGCCGTCTAGCAGAGGAAGTCACGACACTCGTACATGGCCGTGAATCA    939

BSNT_04322___    940 CTGGAGCAAGCCATCAACATCTCCCAAGCGCTGTTCAGCGGCAATATTAA    989
                     ||.||.||.||..||||||||||..|.||.||.||||..||..|.|||||
BPUM_2615___t    940 CTAGAACAGGCAGTCAACATCTCAAATGCACTATTCAAAGGTGAGATTAA    989

BSNT_04322___    990 AGAGCTTTCTGCTCAAGACGTAAAAGTAGGCTTTAAAGATGTTCCTTCTA   1039
                     |...|||||.||..||||.||.||||||||||||||||||||.||.||.|
BPUM_2615___t    990 ATCTCTTTCAGCCGAAGAAGTCAAAGTAGGCTTTAAAGATGTACCATCAA   1039

BSNT_04322___   1040 TGGAAGTTGA----CAGCACCCAAGAGCTTTCACTTGTAGATGTGTTGGT   1085
                     ||||    ||    ||||||..||||..|..|||||||.|||.|..|.||
BPUM_2615___t   1040 TGGA----GAAAAGCAGCACAGAAGAATTAACACTTGTTGATCTTCTTGT   1085

BSNT_04322___   1086 GCAATCTAAATTATCTCCTTCTAAACGCCAAGCGCGTGAAGACATCCAAA   1135
                     ..||||.||..|.||.||.||.|||||||||||.||||||||||||..||
BPUM_2615___t   1086 AGAATCAAAGCTGTCACCATCAAAACGCCAAGCACGTGAAGACATCACAA   1135

BSNT_04322___   1136 ACGGAGCTGTTTACATTAACGGCGAACGCCAAACAGAAATAAATTATAC-   1184
                     |.||.||.||||..||.|||||.||..|.|||||.|  |||||...||| 
BPUM_2615___t   1136 ATGGCGCAGTTTCTATCAACGGAGAGAGACAAACCG--ATAAAGACTACG   1183

BSNT_04322___   1185 -CCTATCGGCTGAAGACCGCATCGAAAATCAATTTACTGTTCTGCGCCGC   1233
                      |||.||.||||||||..|.||.|||||.||||||||.||..|..|..|.
BPUM_2615___t   1184 TCCTTTCAGCTGAAGATAGAATTGAAAACCAATTTACCGTCTTAAGAAGA   1233

BSNT_04322___   1234 GGGAAGAAAAAATACTTCCTTGTGACGTATAAATAA   1269
                     |||||.||.|||||.|||||||||||||||||||||
BPUM_2615___t   1234 GGGAAAAAGAAATATTTCCTTGTGACGTATAAATAA   1269


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