Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04324 and BPUM_2617
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_04324___acuA.1.24716.seq
# -bsequence dna-align/BPUM_2617___acuA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04324___acuA-BPUM_2617___acuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04324___acuA-BPUM_2617___acuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04324___acuA
# 2: BPUM_2617___acuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 466/640 (72.8%)
# Similarity: 466/640 (72.8%)
# Gaps: 14/640 ( 2.2%)
# Score: 1597.5
#
#
#=======================================
BSNT_04324___ 1 GTGGAACATCATAAAACATACCATTCAGCAAACATCAAAACAGCAACCGG 50
|||||.||||.||||||.||..|||||..||.|||..|...||.|||.||
BPUM_2617___a 1 GTGGAGCATCCTAAAACTTATTATTCAAAAATCATTGAGCGAGAAACAGG 50
BSNT_04324___ 51 CTCTTTACTGATAGAAGGGCCTGTCTCT---CCAGAGGATTTG-GCAGGT 96
.||..|.||.||.|||||.||.||..|| .||||| .||| |.| .
BPUM_2617___a 51 TTCCATCCTTATTGAAGGTCCGGTACCTGCATCAGAG--CTTGCGAA--C 96
BSNT_04324___ 97 TATGAGTTTCATAAAGATTTAACCGCATTTCGCCCGCCTCGCGAGCAGCA 146
|||...||||||.|||...||||.|||||||||.||||....||.|||.|
BPUM_2617___a 97 TATACCTTTCATGAAGGACTAACGGCATTTCGCACGCCAGAGGAACAGAA 146
BSNT_04324___ 147 TGAAGCGCTAGTCGACATTGCAGGCCTTCCCGAAGGGCGCATTATTATTG 196
..||||.||.||.||.||.||||.||||||.|||||.||.|||||.||||
BPUM_2617___a 147 ACAAGCACTTGTTGAAATAGCAGACCTTCCAGAAGGACGTATTATCATTG 196
BSNT_04324___ 197 CCAGAGATGGCCGAAC-CATTATCGGCTATGTCACGTATTTATATCCTGA 245
|..||| |||..||.| ..||.||||||||||||||||||||||||||||
BPUM_2617___a 197 CACGAG-TGGATGAGCTTGTTGTCGGCTATGTCACGTATTTATATCCTGA 245
BSNT_04324___ 246 CCCGCTCGAAAGATGGTCTGAAGGAAATATGGAGGATTTGATTGAGCTCG 295
.|||||.||..|.|||||.||.||.||.|||||..||||.||.|||||.|
BPUM_2617___a 246 TCCGCTTGAGCGCTGGTCAGAGGGCAACATGGACAATTTAATCGAGCTTG 295
BSNT_04324___ 296 GAGCCATCGAAGTAGCGCCGGACTATCGGGGATGCGCTGTCGGAAAGACG 345
|.||.||.||.||.||.||....|.|.|.||.|||.|..|.||.||| |.
BPUM_2617___a 296 GCGCGATTGAGGTCGCTCCTCCATTTAGAGGTTGCTCACTTGGCAAG-CA 344
BSNT_04324___ 346 CT--CCTGACCGTCAGCATGATGGATGAACAAATGGAAAACTACATTGTG 393
.| |.||| .|||||||||||||||||.||||||||.||.||.||.||.
BPUM_2617___a 345 TTTACTTGA-TGTCAGCATGATGGATGAGCAAATGGAGAATTATATCGTC 393
BSNT_04324___ 394 ATGACGACAGAATATTACTGGCATTGGGATTTAAAAGGGATGAAAAAAGA 443
||.||.||.||||||||||||||||||||||||||.||||..||.|||.|
BPUM_2617___a 394 ATTACAACTGAATATTACTGGCATTGGGATTTAAAGGGGACAAAGAAAAA 443
BSNT_04324___ 444 TGTGTGGGAATACAGAAAGATCATGGAAAAGATGATGAATGCAGGCGGAT 493
.||.|||||||||.|.|||||.|||||.||.||||||||.||||||||..
BPUM_2617___a 444 CGTATGGGAATACCGCAAGATGATGGAGAAAATGATGAACGCAGGCGGTC 493
BSNT_04324___ 494 TGGTCTGGTTTGCAACGGATGAGCCGGAGATCAGCTCCCACCCTGCAAAC 543
|.||.|||||||||||.||.|||||.|||||||||||.||.||.||.||.
BPUM_2617___a 494 TTGTTTGGTTTGCAACAGACGAGCCAGAGATCAGCTCACATCCAGCCAAT 543
BSNT_04324___ 544 TGTCTGATGGCCCGCATTGGGAAAAACGTCAGCCAAGAATCAATTGAGCA 593
|||.|.||||||.|.||.||||||||.||.||.|..||.||.|||||||.
BPUM_2617___a 544 TGTTTAATGGCCAGAATCGGGAAAAATGTGAGTCCTGATTCGATTGAGCG 593
BSNT_04324___ 594 ATTTGACAGGCTCCGTTTTTATCATCGTTATATGTATTAA 633
.||.||..|.||.||.||..||||.||.|.||||||||||
BPUM_2617___a 594 TTTCGATCGTCTTCGCTTCCATCAGCGCTTTATGTATTAA 633
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