Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04348 and BPUM_2632

See Amino acid alignment / Visit BSNT_04348 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence dna-align/BSNT_04348___ytoQ.1.24716.seq
#    -bsequence dna-align/BPUM_2632___ytoQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04348___ytoQ-BPUM_2632___ytoQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04348___ytoQ-BPUM_2632___ytoQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04348___ytoQ
# 2: BPUM_2632___ytoQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity:     338/449 (75.3%)
# Similarity:   338/449 (75.3%)
# Gaps:           4/449 ( 0.9%)
# Score: 1222.0
# 
#
#=======================================

BSNT_04348___      1 ATGGAGTTTATCGTCTATTTAGCAGGAGAAATCCACAGCAATTGGCGCGA     50
                     |||.|.||.|..||||||||||||||||||||.||.|||.|.|||||.||
BPUM_2632___y      1 ATGCAATTAACTGTCTATTTAGCAGGAGAAATTCATAGCCAGTGGCGTGA     50

BSNT_04348___     51 GGAAATTAAAGAAAAAACAAAATCACTGAAGCTCCCGATTACGTTTGTTG    100
                     .|||||.||.||.||||...||||..||||.||.||..|.||.|||||.|
BPUM_2632___y     51 TGAAATCAAGGAGAAAAGCCAATCGTTGAAACTGCCAGTGACATTTGTAG    100

BSNT_04348___    101 GCCCGATGGAGAATCATGACCGCTCAGACAATATTGGTGAAGAAATTATG    150
                     |.||.||||||||||||||||||||.||..|.||||||||.||.|||.|.
BPUM_2632___y    101 GTCCAATGGAGAATCATGACCGCTCCGATCACATTGGTGAGGACATTTTA    150

BSNT_04348___    151 GGCGTACAGCCAAATGCCGTTTTAAAGGATGACAAAGCCTCTGACATCAA    200
                     ||.|.||||||.||||||.||||.||.|||||....||.|||||..|.||
BPUM_2632___y    151 GGTGAACAGCCGAATGCCATTTTCAAAGATGATGCTGCTTCTGATTTGAA    200

BSNT_04348___    201 CAACTTCAGAACCGCCGTCCTGATGAATAAAG-CAGACTTTGTGATCGCC    249
                     |||.||..|.||.|...|||| ||.||..||| |||||.|.||.||.|||
BPUM_2632___y    201 CAATTTTCGTACTGAGATCCT-ATTAAACAAGTCAGACATCGTCATTGCC    249

BSNT_04348___    250 CTGTTTGGCGAAAAGTACAAACAGTGGAACACGGCAATGGATGCATCATA    299
                     |..|||||.||.||.||.|||||||||||||||||||||||||||||...
BPUM_2632___y    250 CGCTTTGGTGAGAAATATAAACAGTGGAACACGGCAATGGATGCATCTGC    299

BSNT_04348___    300 TGCGATCGCAAAAGGAAAACCCCTGATTATCATCCGGCCGGAATCGCTCC    349
                     |||.||.||.|||||.|||||.||.|||.|.|||||.||..||...||.|
BPUM_2632___y    300 TGCCATTGCGAAAGGGAAACCTCTCATTTTGATCCGTCCAAAAGAACTGC    349

BSNT_04348___    350 ACCATCCTTTAAAAGAGCTTTCCAATAAAGCGAATATTACGGTTGAAACC    399
                     |||||||..||||.|||||.||.||||||||||||||.||.||.||||||
BPUM_2632___y    350 ACCATCCACTAAAGGAGCTATCAAATAAAGCGAATATCACTGTAGAAACC    399

BSNT_04348___    400 GTTAACCAAGCCATTAAGGCCCTTTCCTATCTATTTGAAACAG-AATAA    447
                     ||.||||||||.||.|||||..|.||.||..|.|||| ||||| |||||
BPUM_2632___y    400 GTGAACCAAGCAATCAAGGCGTTATCTTACGTGTTTG-AACAGCAATAA    447


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