Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04373 and BPUM_2647
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence dna-align/BSNT_04373.1.24716.seq
# -bsequence dna-align/BPUM_2647___ytzE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04373-BPUM_2647___ytzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04373-BPUM_2647___ytzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04373
# 2: BPUM_2647___ytzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 149/222 (67.1%)
# Similarity: 149/222 (67.1%)
# Gaps: 48/222 (21.6%)
# Score: 645.0
#
#
#=======================================
BSNT_04373 1 ------------------------------------------------AT 2
||
BPUM_2647___y 1 TTGAAACCTTCAACAAACCGTATGATGACTCGAATAAAATCAGTCTATAT 50
BSNT_04373 3 GTTTATCCAAGAAAAAGGTCTTGTGACAACACAGGAACTGGTTGACGAAT 52
|||.||.|||||.||||||||||||||.|||||.||.||||||||.||||
BPUM_2647___y 51 GTTCATTCAAGAGAAAGGTCTTGTGACGACACAAGAGCTGGTTGATGAAT 100
BSNT_04373 53 TCGGCATTACACCTAGAACGATTCAAAGAGACTTAAATGTGTTGGCATAT 102
||||.||.|||||||||||.|||||||||||||||||.|||.|.||.|||
BPUM_2647___y 101 TCGGGATCACACCTAGAACCATTCAAAGAGACTTAAACGTGCTTGCCTAT 150
BSNT_04373 103 AATGATCTTGTTCATAGTCCAAGCCGTGGCAAGTGGGAGACAACGAGAAA 152
||.|||||||||||||||||||||.|.|||||.|||||.|||||||||||
BPUM_2647___y 151 AACGATCTTGTTCATAGTCCAAGCAGAGGCAAATGGGAAACAACGAGAAA 200
BSNT_04373 153 GAAAGTAAAGATTACCTCATAA 174
.||||||||.||..|.||.|||
BPUM_2647___y 201 AAAAGTAAAAATATCATCTTAA 222
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