Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04389 and BPUM_2660

See Amino acid alignment / Visit BSNT_04389 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_04389.1.24716.seq
#    -bsequence dna-align/BPUM_2660___lplBA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04389-BPUM_2660___lplBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04389-BPUM_2660___lplBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04389
# 2: BPUM_2660___lplBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 985
# Identity:     747/985 (75.8%)
# Similarity:   747/985 (75.8%)
# Gaps:          38/985 ( 3.9%)
# Score: 2754.5
# 
#
#=======================================

BSNT_04389         1 ATGAAAACAGCAGAA-------GCGCAAGCGCCGGCTGT---TGATGCAG     40
                     |||||||||| ||.|       || |||     ||.|||   ||..||||
BPUM_2660___l      1 ATGAAAACAG-AGGATGTCACTGC-CAA-----GGGTGTGCCTGCGGCAG     43

BSNT_04389        41 TCATTTTTAAAAAAGAAAAAAGAAAGCGCTTAC-TAAGCAA--GCTGAAT     87
                        .|||.|||||||||||.||||||||||||| |||.|||  |||.|.|
BPUM_2660___l     44 ---CTTTGAAAAAAGAAAATAGAAAGCGCTTACTTAATCAAATGCTTAGT     90

BSNT_04389        88 CAGCAAAAATATTTGTACTTGATGATTTTGCCGGGGTGTATTTATTTT-T    136
                        |||||.|.||||||..|.||||||||.||.|||...||||||||| |
BPUM_2660___l     91 ---CAAAAGTTTTTGTATCTCATGATTTTACCAGGGCTCATTTATTTTCT    137

BSNT_04389       137 TGCTTTTTAAGTATGTTCCGATGTGGGGAATTGTGATTGCGTTTCAGGAT    186
                     || |.|||||.|||||.|||||||||||..|..|.|||||.|||||.|||
BPUM_2660___l    138 TG-TCTTTAAATATGTGCCGATGTGGGGGCTGATCATTGCCTTTCAAGAT    186

BSNT_04389       187 TATCAGCCGTTCCTCGGCATTTTGGGCAGTGAGTGGGTGGGGCTGAAGCA    236
                     ||.||||||||.|||||.|||.|.||||||||||||||.||..|.||.||
BPUM_2660___l    187 TACCAGCCGTTTCTCGGTATTCTTGGCAGTGAGTGGGTTGGCTTCAAACA    236

BSNT_04389       237 TTTTATCAGGCTGTTTACTGAGCCTACATTTTTTCTCTTGTTAAAAAACA    286
                     .|||||..|..|||||||.||.||.||||||||..||||.||||||||.|
BPUM_2660___l    237 CTTTATTCGCTTGTTTACAGAACCAACATTTTTCATCTTATTAAAAAATA    286

BSNT_04389       287 CGCTCGTGTTATTTGCTTTGAACCTGGCCATATTTTTCCCGGTGCCGATA    336
                     |.||..|.||||||||..||||..|.|..||.||.||.||..|.||.||.
BPUM_2660___l    287 CACTGATTTTATTTGCCATGAATGTCGTGATTTTCTTTCCAATTCCAATC    336

BSNT_04389       337 CTGCTGGC---GCTTTTATTGAACGAAGTGCGGATT-GCTCTCTTTAAAA    382
                     .|..||||   |||||||   ||.||.|| |.|||| ||..|.|||||.|
BPUM_2660___l    337 TTATTGGCCCTGCTTTTA---AATGAGGT-CAGATTGGCATTGTTTAAGA    382

BSNT_04389       383 AATTTGTTCAGACGCTGATTTATATCCCGCATTTTATGTCTTGGGTCATT    432
                     ||||||||||||||.||||.||.||.||.||.||.|||||.|||||.|||
BPUM_2660___l    383 AATTTGTTCAGACGATGATATACATTCCTCACTTCATGTCATGGGTGATT    432

BSNT_04389       433 GTTGTATCACTT-TCGTTTGTGCTGTTAACGGTAGACGGAGGCTTGATTA    481
                     ||.||.|| ||| ||.|||||..|||||||.|||||.||.||.||.||.|
BPUM_2660___l    433 GTCGTGTC-CTTATCCTTTGTTTTGTTAACAGTAGATGGCGGATTAATCA    481

BSNT_04389       482 ATGAACTGATTGTGTTTTTTGGCGGTGAAAAAATCAATTTTCTGCTGAAC    531
                     |||||.||||||..||.|||||.||.|||||.||.||.||.||.||.|..
BPUM_2660___l    482 ATGAATTGATTGCTTTCTTTGGAGGGGAAAAGATTAACTTCCTTCTTAGT    531

BSNT_04389       532 GAAGAATGGTTCCGGCCCCTGTATATTCTGCAGGTTATCTGGAGGGAAGC    581
                     .|.|||||||||.||||..||||.|||.|.||.||.||||||.|.|||||
BPUM_2660___l    532 CAGGAATGGTTCAGGCCGATGTACATTTTACAAGTGATCTGGCGAGAAGC    581

BSNT_04389       582 GGGCTGGTCGACGATCATTTATCTGGCGGCCATTACAGCGGTTGACCCCC    631
                     .||||||||||||||||||||.||.|||||.|||||||||||.||.||.|
BPUM_2660___l    582 AGGCTGGTCGACGATCATTTACCTTGCGGCGATTACAGCGGTAGATCCGC    631

BSNT_04389       632 AGCTGTATGAAGCGGCGAAAATGGACGGAGCGGGACGGCTGCGGCAAATG    681
                     ||||.||||||||.|||||||||||.|||||.||..|.|||.|.||||||
BPUM_2660___l    632 AGCTCTATGAAGCAGCGAAAATGGATGGAGCCGGCAGACTGAGACAAATG    681

BSNT_04389       682 TGGCATATTACGCTTCCCGCCATTAAAAGCGTTATCGTCGTTTTGCTGAT    731
                     ||||||||.||||||||.|||||||||||.||.||.||||||.|.||.||
BPUM_2660___l    682 TGGCATATCACGCTTCCTGCCATTAAAAGTGTGATTGTCGTTCTACTAAT    731

BSNT_04389       732 TTTGAAAATCGGAGACACGCTGGAGCTTGGCTTCGAGCATGTGTATTTGC    781
                     |||||||||.||.|||||..|.|||||||||||.||||||||.||.||..
BPUM_2660___l    732 TTTGAAAATTGGTGACACATTAGAGCTTGGCTTTGAGCATGTCTACTTAT    781

BSNT_04389       782 TGTTAAATGCGACTAACAGGGAAGTGGCGGAAATTTTTGATACGTATGTT    831
                     |..|.|||||.||.|||.|.|||||.||.|||||.|||||||||||.|||
BPUM_2660___l    782 TACTCAATGCAACGAACCGAGAAGTAGCAGAAATCTTTGATACGTACGTT    831

BSNT_04389       832 TATACTGCAGGGCTGAAACAGGGCCAATTCAGCTACAGTACAGCAGTCGG    881
                     |||||.||.||.||.||.||.||.|||||.|||||.|||||.||.||.||
BPUM_2660___l    832 TATACAGCTGGTCTTAAGCAAGGGCAATTTAGCTATAGTACCGCTGTTGG    881

BSNT_04389       882 CGTATTTAAAGCGGCGGTCGGGCTGATTTTGGTCATGCTAGCGAATCGTT    931
                     ..||||||||||.||.||.||.||.||||||||.|||||.|||||.||||
BPUM_2660___l    882 TCTATTTAAAGCAGCTGTTGGACTCATTTTGGTTATGCTTGCGAACCGTT    931

BSNT_04389       932 TGGCGAAGAAATTTGGCGAGGAAGGAATTTATTAA    966
                     |.||||||||||||||.||.|||||.||.||.|||
BPUM_2660___l    932 TAGCGAAGAAATTTGGGGAAGAAGGTATCTACTAA    966


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