Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04418 and BPUM_2670

See Amino acid alignment / Visit BSNT_04418 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence dna-align/BSNT_04418___ytvB.1.24716.seq
#    -bsequence dna-align/BPUM_2670___ytvB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04418___ytvB-BPUM_2670___ytvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04418___ytvB
# 2: BPUM_2670___ytvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity:     216/433 (49.9%)
# Similarity:   216/433 (49.9%)
# Gaps:         161/433 (37.2%)
# Score: 748.0
# 
#
#=======================================

BSNT_04418___      0 --------------------------------------------------      0
                                                                       
BPUM_2670___y      1 ATGGATTATGACGGAACAGCAGAATGGCATTACAGGGGGCTGGACAGCCT     50

BSNT_04418___      0 --------------------------------------------------      0
                                                                       
BPUM_2670___y     51 GAAGTCGCTTTACTATTCTAAGGGCTTTAGGAAGGTGATGAAAATGCTGC    100

BSNT_04418___      1 -----------------------------------ATGGGGATTCTCGGT     15
                                                        |||||.|||||||||
BPUM_2670___y    101 AACAAGTCATTATTGCTTGCGCCATTGGAGGGGTCATGGGCATTCTCGGT    150

BSNT_04418___     16 CATGTGAAAAAGAGAGGCAGGCTGGAGAAGCCCAGAATGACGAAGCGGTT     65
                     ||.||.||.||.|.|||||||||.|||||||||||||||||.||...|||
BPUM_2670___y    151 CACGTAAAGAAAAAAGGCAGGCTAGAGAAGCCCAGAATGACAAAAAAGTT    200

BSNT_04418___     66 TATCTACCTTGGATTTTTGGAAGATTGGTTTATCGGCATGA---CGGCTT    112
                     |||.||..|.||.|||.|.|||||||||.|..|.||.||||   |.|||.
BPUM_2670___y    201 TATTTATTTAGGGTTTATTGAAGATTGGCTCGTTGGGATGATTGCCGCTA    250

BSNT_04418___    113 C-CATTTTACTTGTATTATCCGCTGACCCCGATTCAGGAATTCAACTT-G    160
                     | |    |.|||||.||||||.|..|.|||||.||..|..|.| |||| |
BPUM_2670___y    251 CAC----TGCTTGTCTTATCCTCAAATCCCGAATCTAGTCTGC-ACTTGG    295

BSNT_04418___    161 TCATCTTATCCATTATCTCAGGCTACGGCGGTGAAGCTGTTCTCAGAAGT    210
                     ||||||||||.|||||.|||||.|||||.||.|||||.|||||..||||.
BPUM_2670___y    296 TCATCTTATCAATTATTTCAGGTTACGGAGGAGAAGCAGTTCTGCGAAGC    345

BSNT_04418___    211 TTTGACTTTGTGAGAGAAC----TGAACAGCGGCGGCGAACCGGCCGAGT    256
                     |||||||||||||||||||    |..|||        |||  .||.||.|
BPUM_2670___y    346 TTTGACTTTGTGAGAGAACAGCATTCACA--------GAA--TGCAGACT    385

BSNT_04418___    257 CCAAACGTCA-AACCAAAACTCCACCCGAATAA    288
                     ||||.||||| |||| ...||||||.|||||||
BPUM_2670___y    386 CCAACCGTCATAACC-GCTCTCCACACGAATAA    417


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